Gene Information

Name : CMM_0334 (CMM_0334)
Accession : YP_001221074.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Virulence
Product : putative organic acid synthase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0147
EC number : -
Position : 408202 - 409668 bp
Length : 1467 bp
Strand : +
Note : putative anthranilate synthase (CAG20074.1| hypotetical anthranilate synthase [Photobacterium profundum]; NP_405477.1| putative salicylate synthetase [Yersinia pestis]). putatively involved in the synthesis of an aromatic acid (salicylate, isochorismate)

DNA sequence :
ATGCCCGCAGCCCCCGTGACCCGCGTAGCCGAGCTCCGGATCACCCGCGACCCGCTCGGCGCCGTCGCCGACCTCGCGCG
GGCCTTCCGCGACGAGCCGCACGTGATCCTCGAGGAGGCGGGGCGGTTCTCCTGCGCGATCGGCGCGTGGGCCGAGGTCG
TGGTCGACCGGAGGGTCGTCCGCCTGCGCGTCCGGGGCGAGGCGGAGGTGGTCGTGCCGTGGCGGGATCGGCCCCTGCGC
GTGGTCGACCGCCTGCTCGCGGGCCTCGGCCCCGACCGCGGGCGCGCCTACGGCACCGCGTGCTTCGAGCTGGCGCGCGC
GCACGCCGGCATGCCGGTGGCCGCGGAGGCGGGGGAGCTCCTGCACGTGATCCTGCCGCGCACGGAGGTGGTCATCGCCG
ACGGCCTCGCGACCGTCCGCTCGGGGGACGCGCGGGAGGCGGCGGAGGTCGCGCGGATCCTGGGCGCGGCCGAGCCCGCG
CCGTCGCCGTCGCCGTCGCCCGAGCCCCACCCCTGCCCCGCACCCGACCGCCCCGGCGTCGTCGATCCCGAGGAGGGCCG
CGAGCGCTACCTCGCCGCGGTCGCGTCGGGCGTCGCCGCGATCCACGCGGGGGAGCTGCAGAAGGTCGTCGTGTCGCGCC
GGGTGCCCGTCACGGGCGAGGTGGACCTGCCCGCCACCTTCGTGCGCGGACGCCGGGCCAACACGCCCGCCCGCTCCTAC
CTCCTGGGACTCGGCGGGATCGAGGCGGTGGGCTTCAGCCCCGAGATCGTCGTCGCGGTGGACGCGCGGGGCACCGTGCG
CACCCAGCCGCTCGCCGGCACGCGGGCGCTCGTCGCCGACCCGATCGAGTCGCGGCGGCTGCGCGAGGAGCTCCTGTCGG
ACGCGAAGGAGATCCACGAGCACGCCATCTCGGTGAAGCTCGCGGTCGAGGAGATGGCGCCCGTGTGCCGCCCGGGCAGC
GTGCGCGTCGAGGAGTTCATGGTGGTGGAGGAGCGCGGCACGGTGCAGCACCTGGGATCCCGGGTGGCGGGCGAGCTCGC
CGACGGCCTCACCTGCTGGGACGCGCTGGCCGCGCTGTTCCCGGCCGTCACCGCGTCGGGCGTCCCCAAGCGCGCCGCGT
TCGACCTCATCCGCCGACTGGAGGGGCACGACCGCGGCCTCTACGCCGGCGCGGTCCTCCAGATCGAACCGGACGGAGCG
CTCGACGCGGCCCTGGTGCTGCGGACGCTGTTCCGGCGCGGCGACGCCACGTGGCTGCAGGCGGGCGCGGGCGTCGTGGG
GGCATCGTCTCCGGCGCGCGAGCTCGAGGAGACGCGCGAGAAGCTGGCGAGCATCGCGGACCACGTGGTCCGCGCTCGCG
AACCCGGCCGCGCGGCGCATGCGTCGGCGTCGGTGGATGCGGGCGCGAGCGCGGGTGAGCCCGGCGTCAGCGCGCGCGCC
CCGCGCGGAGCCGCCGCCGGCCGGTGA

Protein sequence :
MPAAPVTRVAELRITRDPLGAVADLARAFRDEPHVILEEAGRFSCAIGAWAEVVVDRRVVRLRVRGEAEVVVPWRDRPLR
VVDRLLAGLGPDRGRAYGTACFELARAHAGMPVAAEAGELLHVILPRTEVVIADGLATVRSGDAREAAEVARILGAAEPA
PSPSPSPEPHPCPAPDRPGVVDPEEGRERYLAAVASGVAAIHAGELQKVVVSRRVPVTGEVDLPATFVRGRRANTPARSY
LLGLGGIEAVGFSPEIVVAVDARGTVRTQPLAGTRALVADPIESRRLREELLSDAKEIHEHAISVKLAVEEMAPVCRPGS
VRVEEFMVVEERGTVQHLGSRVAGELADGLTCWDALAALFPAVTASGVPKRAAFDLIRRLEGHDRGLYAGAVLQIEPDGA
LDAALVLRTLFRRGDATWLQAGAGVVGASSPARELEETREKLASIADHVVRAREPGRAAHASASVDAGASAGEPGVSARA
PRGAAAGR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ybtS YP_070129.1 salicylate synthase Irp9 Not tested HPI Protein 8e-47 44
ybtS CAA21385.1 - Virulence HPI Protein 8e-47 44
irp9 CAB46570.1 salicylate synthetase, Irp9 Virulence HPI Protein 1e-46 44
irp9 YP_001006810.1 salicylate synthase Irp9 Not tested HPI Protein 2e-46 44
APECO1_1052 YP_853070.1 salicylate synthase Irp9 Not tested PAI IV APEC-O1 Protein 8e-47 44
ybtS YP_002346907.1 salicylate synthase Irp9 Not tested HPI Protein 8e-47 44
ybtS NP_669701.1 salicylate synthase Irp9 Not tested HPI Protein 8e-47 44
ybtS NP_993012.1 salicylate synthase Irp9 Not tested HPI Protein 2e-46 43