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Name : clpY (CMM_0316) Accession : YP_001221056.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Virulence Product : chaperone ATPase Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 375588 - 377780 bp Length : 2193 bp Strand : + Note : putative ATP-dependant protease, ATPase subunit (ZP_00225929.1| COG0542: ATPases with chaperone activity,ATP-binding subunit [Kineococcus radiotolerans SRS30216]; YP_056693.1| ATP-dependent protease (Clp chaperone) [Propionibacterium acnes KPA171202]). pf DNA sequence : GTGGCCAACATGCAGGGCGCGCCCGCCACCGACGAGAACGCGAAGACCGCGCTCGAGCAGTACGGGGTGAACCTGACCGA GATCGCGAAGAGCGGCAAGCTCGACCCGGTCATCGGACGCGACGCGGAGATCCGGCGCATCAGCCAGGTGCTCACGCGGC GCACCAAGAACAACCCGGTGCTCATCGGCGAGCCCGGCGTCGGCAAGACCGCCGTCGTCGAGGGCCTCGCGCAGCGCATC GTCGCGGGCGACGTGGCCGACTCGCTCAAGGGCAAGCAGCTGGTGTCGCTGGATCTCGCCGCTCTCGTCGCGGGCGCGAA GTACCGCGGGGAGTTCGAGGAGCGGCTCAAGGCGGTGCTCAAGGAGATCGACGACGCCGACGGCGAGGTCATCACGTTCG TCGACGAGCTGCACACGCTCATGGGGGCGGGCGGCGGCGAGGGATCCGTCGCCGCGTCGAACATGCTCAAGCCCATGCTG GCGCGCGGCGAGCTGCGCCTCATCGGCGCCACCACGCTCGACGAGTACCGGCAGTACATCGAGAAGGACGCCGCGCTCGA GCGCCGCTTCCAGCAGGTGTACGTCGGCGAGCCGAGCGTCGAGGACACGGTCGCGATCCTCCGCGGTCTCAAGGGCCGGT ACGAGGCCCACCACCAGGTGCCCATCACGGACGCGGCGCTCGTCGCGGCCGCGTCGCTCTCCAACCGCTACATCCCCGCC CGGCAGCTGCCCGACAAGGCCATCGACCTCATCGACGAGGCCGCGTCGCGCCTGCGGATGGAGATCGACTCGTCGCCCGT CGAGATCGACGAGCTGCGGCGCGCGGTCGACCGCATGCGGCTGGAGGAGCTCGCGCTCAAGCGCGAGAAGGACGAGGCGT CGAAGGCGCGGCTGGCGAAGCTGCGCGAGGACGTCGCGGCGCGCGAGCAGACCCTCGGCGAGCTGCAGCGGCGCTGGGAG GCGGAGCGCGCGAGCGTCAACCGCGTCGGCAAGCTGAAGGACGAGCTCAACGAGCTGCGGATCCGCGCCGAGCGGGCGCA GCGCGAGGGGAACCTCGAGAAGGCGTCGCGCCTGCTCTACGGCGAGATCCCCGTGATCGAGCGCGAGGTCGCGCAGGCCG AGGCCGCCGAGTCGGTGCCGTCGGCCGAGGACCGCATGGTCAACGAGCAGGTGACCGCCGAGGACGTCGCGGCGGTGGTC GCGGCGTGGACGGGGATCCCCGTCGGCCGGCTGCTCCAGGGCGAGACCGAGAAGCTGCTGCACCTCGAGCAGGAGCTGGG CAAGCGGCTCATCGGCCAGAAGCAGGCGGTGCGGGCCGTCGCGGACGCGGTGCGCCGCACGCGCGCCGGCATCTCGGATC CCGACCGGCCCACCGGATCCTTCCTCTTCCTCGGCCCCACGGGCGTCGGCAAGACGGAGCTCGCGAAGGCGCTCGCGGAG TTCCTGTTCGACGACGAGAAGGCGATGGTCCGCATCGACATGAGCGAGTACGGCGAGAAGTTCGCCGTCTCGCGCCTGGT GGGCGCGCCTCCCGGGTACGTCGGCTACGAGCAGGGCGGCCAGCTCACCGAGGCAGTCCGGCGGCGCCCGTACTCGGTGG TGCTGCTCGACGAGGTCGAGAAGGCGCACCCCGAGGTGTTCGACGTGCTGCTGCAGGTGCTCGACGACGGCCGCCTCACC GACGGCCAGGGCCGCACGGTCGACTTCCGCAACGTGATCCTCGTGCTCACCAGCAACCTCGGCTCGCAGTTCATCAGCGA CGCCACGCTGCCGCTCGACCAGCGCGAGCAGGCCGTGCAGCAGCTCGTGCGCCAGACGTTCAAGCCGGAGTTCGTGAACC GGCTCGACGACATCGTGGTGTTCCAGACGCTCTCGATGGACGACCTCGCGCAGATCGTGGAGCTCTACATCGACCGGCTC GGCGTGCGGCTCTCGGACCGTCGGCTCTCGCTCGGCGTCACGCCGGACGCCCGCCGCTGGCTGGCCGAGCGCGGCCACGA TCCGCTGTACGGCGCGCGTCCGCTGCGCCGGCTCATGCAGCGCGAGATCGACGACCGCCTCGCGCGCGAGCTGCTCGCGG GCGACATCCGCGACGGCGACGCCGTGCGGGTCGACCTGGCGCCCGACGGCGACGGCCTCACGGTCAGCCGCGCGTGGAGC GACGAGCCGGAGGATCAGGCGCCCGGCGCCTGA Protein sequence : MANMQGAPATDENAKTALEQYGVNLTEIAKSGKLDPVIGRDAEIRRISQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRI VAGDVADSLKGKQLVSLDLAALVAGAKYRGEFEERLKAVLKEIDDADGEVITFVDELHTLMGAGGGEGSVAASNMLKPML ARGELRLIGATTLDEYRQYIEKDAALERRFQQVYVGEPSVEDTVAILRGLKGRYEAHHQVPITDAALVAAASLSNRYIPA RQLPDKAIDLIDEAASRLRMEIDSSPVEIDELRRAVDRMRLEELALKREKDEASKARLAKLREDVAAREQTLGELQRRWE AERASVNRVGKLKDELNELRIRAERAQREGNLEKASRLLYGEIPVIEREVAQAEAAESVPSAEDRMVNEQVTAEDVAAVV AAWTGIPVGRLLQGETEKLLHLEQELGKRLIGQKQAVRAVADAVRRTRAGISDPDRPTGSFLFLGPTGVGKTELAKALAE FLFDDEKAMVRIDMSEYGEKFAVSRLVGAPPGYVGYEQGGQLTEAVRRRPYSVVLLDEVEKAHPEVFDVLLQVLDDGRLT DGQGRTVDFRNVILVLTSNLGSQFISDATLPLDQREQAVQQLVRQTFKPEFVNRLDDIVVFQTLSMDDLAQIVELYIDRL GVRLSDRRLSLGVTPDARRWLAERGHDPLYGARPLRRLMQREIDDRLARELLAGDIRDGDAVRVDLAPDGDGLTVSRAWS DEPEDQAPGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-98 | 43 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 1e-97 | 41 |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 1e-97 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpY | YP_001221056.1 | chaperone ATPase | VFG0080 | Protein | 9e-127 | 44 |
| clpY | YP_001221056.1 | chaperone ATPase | VFG2076 | Protein | 1e-110 | 43 |
| clpY | YP_001221056.1 | chaperone ATPase | VFG2084 | Protein | 4e-105 | 43 |
