Gene Information

Name : fecC2 (CMM_2930)
Accession : YP_001223675.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporterpermease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3252414 - 3253472 bp
Length : 1059 bp
Strand : -
Note : putative iron-siderophore ABC transporter, permease component (NP_535686.1| ABC transporter, membrane spanning protein [iron] [Agrobacterium tumefaciens str. C58]; CAF19214.1| cobalamin/ Fe3+-siderophores transport system,permease component [Corynebacteri

DNA sequence :
ATGTCGCTCCGGGTCCTCGCGCGCGCCTCCGCCCCCGACGCCCCCGAGGGCCGGGCACGGAGCGGACCGACGCGCGCGGC
GGGCCTGCTGCTGGCGCTCGGCGTGCTCGTGCTCGCGGCGCTCGCGAGCATCGCGATCGGATCGCGCGACATCCCGCTCG
GCGCGGTCGTCGACGCCCTCGCGGGACGGCCGCGCGACCCGGCCGAGCTCGTCGTGATCCTCGACCTCCGCGTCCCGCGC
ACCCTCGTCGGCCTCGCCGCTGGCCTCGCGCTCGGGGTCGCCGGGGCGCTCATCCAGGCCGTCACGCGGAACCCGCTGGC
GGATCCCGGCATCCTCGGCGTCACCGCCGGCTCGGCCTTCGCGGTCGCCATCGCGACGGGCGTCCTCGGCGTGACCGCCG
TGAGCGGTTACCTCTGGTTCGCCTTCGGGGGCGCGCTCGTGGCGGCCGTGGTGGTCTACGTCGTGGGATCCGCGGGGCGC
GGCGGCGGGGATCCGGTGCGCCTCACGCTGGCCGGCGTCGCCCTCGGCGCGGTGCTCGCGGGCATCACCTCGGGCATGCT
GCTGGCCGACCCGCAGGGCTTCAGCGCGATGCGCGCATGGGAGTCGGGCTCGCTGCAGGACCGCGGCTGGGACGCGCTCC
TGCCGGTCGCGCCCTTCCTCGCGGCGGGCGTCCTGCTCGCCGCCCTCATCGCCCGGAGCCTCGACGCGGTCGCGCTCGGC
GACGACCTCGCTCGGTCCCTCGGCGCGAACGTCGTCGTGGTGCGGGCCGTGGCCGTCGTCGCCGTGACGCTGCTGGCGGG
CGGGGCGACCGCGATGGCCGGGCCGATCGCGTTCGTCGGGCTGATGATCCCGCACATCGCGCGCTGGATCGTGGGGCCCG
ACCAGCGCTGGATCCTCGCGTACACGATCGTGCTCGCGCCCGTGCTGCTGCTGGCGGCCGACATCGTGGGCCGCGTCGTG
CTGCGGCCGGCCGAGCTGCCCGCCGGGATCGTGACGGCCGTGCTCGGCGCGCCCGTGCTGATCCTGCTCGTGCGCCGGCA
GAGGGCGTCGGGGCTGTGA

Protein sequence :
MSLRVLARASAPDAPEGRARSGPTRAAGLLLALGVLVLAALASIAIGSRDIPLGAVVDALAGRPRDPAELVVILDLRVPR
TLVGLAAGLALGVAGALIQAVTRNPLADPGILGVTAGSAFAVAIATGVLGVTAVSGYLWFAFGGALVAAVVVYVVGSAGR
GGGDPVRLTLAGVALGAVLAGITSGMLLADPQGFSAMRAWESGSLQDRGWDALLPVAPFLAAGVLLAALIARSLDAVALG
DDLARSLGANVVVVRAVAVVAVTLLAGGATAMAGPIAFVGLMIPHIARWIVGPDQRWILAYTIVLAPVLLLAADIVGRVV
LRPAELPAGIVTAVLGAPVLILLVRRQRASGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 9e-16 42
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 9e-16 42
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 9e-16 42
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 9e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecC2 YP_001223675.1 putative iron-siderophore ABC transporterpermease VFG0926 Protein 1e-27 49