Gene Information

Name : fecE (CMM_2928)
Accession : YP_001223673.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Virulence
Product : putative iron-siderophore ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3250434 - 3251276 bp
Length : 843 bp
Strand : -
Note : putative iron-siderophore ABC transporter, ATP-binding protein (NP_827669.1| putative iron(III) dicitrate transport system ATP-binding protein [Streptomyces avermitilis MA-4680]; ZP_00292631.1| COG1120: ABC-type cobalamin/Fe3+-siderophores transport syste

DNA sequence : 
GTGGACGACACCGCCACCGACACCGACACTGCCGCACCCGCCATCGCCGCGCCCGCCGCGCCGCGCCTCCGGGCCGAGGG
GGTCACGCTGTCCTACGACCGGCGGGTGATCTCCGAGCACCTCGACGTCTCCGTGCCCGACCGCTCGTTCACGGTGATCG
TCGGCCCGAACGCGTGCGGGAAGTCGACCCTGCTGCGCGCCCTGTCGCGCCTGCTCGCGCCCACCGCGGGCGGCGTGCTC
CTCGACGACCGGCCGCTCGGCTCCTACCGCGCCAAGGAGGTCGCGCGGATCGTCGGCCTCCTCCCGCAGAGCGCCATCGC
GCCCGACGGGATCACGGTCGCCGACCTCGTGGCGCGCGGCCGCTTCCCGCACCAGAACCTCATCCGCCAGTGGACCCCGA
CCGACGAGGACGCCGTGCAGGAGGCCATGGCCGCCACGGGCGTCGCCGACCTCGCCGCCCGGCACGTCGACGAGCTCTCC
GGCGGCCAGCGCCAGCGCGTGTGGGTCGCGATGGCGCTCGCGCAGCAGACCCCCGTGCTGCTGCTCGACGAGCCGACGAC
GTTCCTCGACATCGCCCACCAGATCGAGCTGCTCGACCTCCTCGCCGACCTGCACCGCGACGGCAGCACCATCGTCGCCG
TGCTGCACGACCTCAACCACGCCGCCCGCTACGCCGACCACCTCATCGTGATGAAGGACGGCCGCGTCGTCTCCTCCGGC
GCCCCGCGCGACATCGTCACGGCCGAGCTCGTGGAGGAGGTCTTCGGCCTCCCGTGCCTCGTGATCGACGACCCCGTCTC
CCACACGCCGCTCATCGTCCCGCGCGGCGGCCGCTGGGCCTGA

Protein sequence : 
MDDTATDTDTAAPAIAAPAAPRLRAEGVTLSYDRRVISEHLDVSVPDRSFTVIVGPNACGKSTLLRALSRLLAPTAGGVL
LDDRPLGSYRAKEVARIVGLLPQSAIAPDGITVADLVARGRFPHQNLIRQWTPTDEDAVQEAMAATGVADLAARHVDELS
GGQRQRVWVAMALAQQTPVLLLDEPTTFLDIAHQIELLDLLADLHRDGSTIVAVLHDLNHAARYADHLIVMKDGRVVSSG
APRDIVTAELVEEVFGLPCLVIDDPVSHTPLIVPRGGRWA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-62 53
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 9e-62 53
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-62 53
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-62 53
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-59 51
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 6e-60 50
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 6e-60 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-47 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-46 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_001223673.1 putative iron-siderophore ABC transporter ATP-binding protein BAC0164 Protein 1e-47 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fecE YP_001223673.1 putative iron-siderophore ABC transporter ATP-binding protein VFG0925 Protein 6e-71 59
fecE YP_001223673.1 putative iron-siderophore ABC transporter ATP-binding protein VFG1042 Protein 9e-48 46