|
Name : kdpB (CMM_2752) Accession : YP_001223497.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : putative potassium-transporting ATPase B chain,P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2216 EC number : 3.6.3.12 Position : 3082615 - 3084765 bp Length : 2151 bp Strand : + Note : putative potassium-transporting ATPase B chain, P-type ATPase (Potassium- translocating ATPase B chain) (YP_054834.1| potassium-transporting ATPase B chain [Propionibacterium acnes KPA171202]; Q9X8Z9|ATKB_STRCO Potassium- transporting ATPase B chain (Pota DNA sequence : ATGACCGCCATGACCACCCCCGAGGCGCCGGCCGAACCGGCTCCCGCCTCACGCGCTCGGGCCATCGACGCCCGGCAGCT CGCCGAGGCGCTCCCCGGCGCGTTCCGGAAGCTGGATCCGCGCCTCATGTGGCGGAACCCGGTGATGCTGATCGTCGAGG TCGGCGCCGCGTTCACCACCGTCCTCGCGATCGCCGAGCCGTTCACGGGCGGCGCGGGATCCTCCGGCGGCAGCGCTGTG CCCGCGACCTTCACGGCCGGGATCGCGCTGTGGCTCTGGCTCACGGTCGTCTTCGCGAACCTCGCGGAGTCGGTGGCCGA GGGCCGCGGCAAGGCGCAGGCCGACAGCCTCCGCAAGACCCGCACCAGCACGATGGCGCACGTCGTCGCGTCCTACGACG CCTCCGGGGATCCCGGCGCCGAGCGCGCCGAGCTCCGCGAGGTGTCGAGCGCGGACCTCACCCTCGGCGACACGGTCGTC GTGGTGGCCGGGGAGTCGATCCCGGGCGACGGCGACGTGGTGTGGGGCATCGCCTCCATCGACGAGTCGGCCATCACGGG CGAGTCCGCCCCTGTGGTCCGCGAGTCCGGCGGCGACCGCAGCGCGGTCACCGGCGGCACGCGCGTGCTGAGCGACCGGA TCGTGGTGCGCATCACCTCGAAGCCCGGCGAGACCTTCGTCGACCGCATGATCGGCCTCGTCGAGGGCGCGTCGCGCCAG CGCACGCCGAACGAGATCGCGCTGAACATCCTGCTGGCGAGCCTCACGATCGTGTTCGTGATCGTGGCGCTCACGCTCAA CCCGATCGCCTCCTACTCGGCGGCCACCGTCAGCGTGCCTGTGCTCATCGCGCTGCTCGTCTGCCTGATCCCGACCACCA TCGGCGCGCTCCTCTCCGCCATCGGCATCGCCGGCATGGACCGGCTCGTGCAGCGGAACGTGCTCGCCATGTCGGGCCGC GCGGTCGAGGCGGCGGGCGACGTCACGACGCTGCTCCTCGACAAGACCGGCACCATCACGTACGGCAACCGCCGCGCCAG CGAGCTGATCCCCGTGGGCGGCGTGACGGGCGACGAGCTCGCCCGCGCCGCGGCCATGTCGTCTCTCGCGGACCCGACGC CGGAGGGATCCAGCGTCGTCGACCTCGCGGTCGCGCAGGGCGTGGACACCGCGACGCTGCCCCGCGGCGTCGACGTGCCG TTCACCGCGCAGACCCGCATGTCGGGCGTCGACCTGCCCGACGGCCGCATCGTCCGCAAGGGCGCGTCGTCCGCCGTGTT CGCCTGGATCGAGGAGGGCGGCCGCGCGCTGCCGAAGCTCGTCCGCGACGAGCTCACCCGGACCGTCGAGGCCGTGTCCA ACGGCGGCGGCACCCCGCTCGTCGTCGCGACCAAGGACGCGGACGGATCCGGTCGCGTGCTCGGCGTCGTGCACCTCAAG GACGTCGTGAAGGACGGCCTCAAGGAGCGCTTCGCGGAGCTGCGCGCGATGGGCATCCGCACGGTGATGATCACGGGCGA CAACCCGCTCACCGCCCGCGCCATCGCCGCAGAGGCCGGGGTCGACGACCACCTCGCCGAGGCCACGCCCGAGGACAAGC TCGCGCTCATCCGCAAGGAGCAGGAGGGCGGCCGCCTGGTCGCCATGACCGGCGACGGCACCAACGACGCGCCCGCGCTC GCGCAGGCCGACGTCGGCGTCGCGATGAACACGGGCACGTCGGCCGCGAAGGAGGCCGGCAACATGGTCGACCTCGACTC GGATCCGACCAAGCTCATCGACATCGTGCGGATCGGCAAGCAGCTGCTCATCACCCGCGGCGCGCTCACGACCTTCTCCA TCGCCAACGACATCGCCAAGTACTTCGCGATCATCCCGGCCATGTTCACGGGCGTCTTCCCGCAGCTCGCGGTGCTCAAC GTGATGCAGCTGCACTCGCCGGCGTCCGCGATCCTCTCCGCGATCGTCTTCAACGCGCTCGTCATCGTGGCGCTCATCCC GCTGGCGCTGAAGGGCGTCGCCTACCGGCCGCTCAGCGCCTCCAAGGTGCTCAGCCGGAACCTGCTCGTCTACGGGGTCG GCGGCGTGATCGCGCCGTTCATCGGCATCAAGCTCGTCGACCTCGTCGTCAGCCTGATCCCCGGCTTCTGA Protein sequence : MTAMTTPEAPAEPAPASRARAIDARQLAEALPGAFRKLDPRLMWRNPVMLIVEVGAAFTTVLAIAEPFTGGAGSSGGSAV PATFTAGIALWLWLTVVFANLAESVAEGRGKAQADSLRKTRTSTMAHVVASYDASGDPGAERAELREVSSADLTLGDTVV VVAGESIPGDGDVVWGIASIDESAITGESAPVVRESGGDRSAVTGGTRVLSDRIVVRITSKPGETFVDRMIGLVEGASRQ RTPNEIALNILLASLTIVFVIVALTLNPIASYSAATVSVPVLIALLVCLIPTTIGALLSAIGIAGMDRLVQRNVLAMSGR AVEAAGDVTTLLLDKTGTITYGNRRASELIPVGGVTGDELARAAAMSSLADPTPEGSSVVDLAVAQGVDTATLPRGVDVP FTAQTRMSGVDLPDGRIVRKGASSAVFAWIEEGGRALPKLVRDELTRTVEAVSNGGGTPLVVATKDADGSGRVLGVVHLK DVVKDGLKERFAELRAMGIRTVMITGDNPLTARAIAAEAGVDDHLAEATPEDKLALIRKEQEGGRLVAMTGDGTNDAPAL AQADVGVAMNTGTSAAKEAGNMVDLDSDPTKLIDIVRIGKQLLITRGALTTFSIANDIAKYFAIIPAMFTGVFPQLAVLN VMQLHSPASAILSAIVFNALVIVALIPLALKGVAYRPLSASKVLSRNLLVYGVGGVIAPFIGIKLVDLVVSLIPGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpB | NP_814334.1 | potassium-transporting ATPase subunit B | Not tested | Not named | Protein | 3e-164 | 58 |
| ef0088 | AAM75291.1 | EF0088 | Not tested | Not named | Protein | 2e-164 | 58 |
| kdpB | BAA82181.1 | potassium-transporting ATPase(B chanin) | Not tested | Type-II SCCmec | Protein | 4e-154 | 55 |
| kdpB | YP_251949.1 | potassium-transporting ATPase subunit B | Not tested | SCCmec | Protein | 1e-153 | 55 |
| SAR0071 | YP_039539.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-154 | 55 |
| kdpB(SCCmec) | NP_370597.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-154 | 55 |
| kdpB | NP_373310.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-154 | 55 |
| kdpB | YP_190029.1 | potassium-transporting ATPase subunit B | Not tested | Type-II SCCmec | Protein | 5e-154 | 55 |
