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Name : kdpA (CMM_2751) Accession : YP_001223496.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 3080942 - 3082618 bp Length : 1677 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGGACACGCTCGCCGGCATCCTCCAGGTCGCGTCCGTCGTCCTGGTCCTCGTCCTCATCCACCGCCCGCTGGGCGACCT CATGGCGCGCATGTACGAGTCGCGCCACGACTCCCGCGTCGAGCGCGGCATCTACCGCCTGATCGGCGTGGATCCCCGCT CCGAGCAGACCTGGCCCGCCTACCTCCGCGCGGTGCTCGCGTTCTCGCTCGTCGGCGTCCTCGTCGTGTACGGGCTGCAG CGCCTCCAGGCGTTCCTCCCCTACGCGCTCGGCCTCCCCGCCGTGCCCGAGGGCCTCTCCTTCAACACGGCCGTCTCGTT CGTCACCAACACGAACTGGCAGTCGTACTCGCCCGAGGCGACCATGGGCTACACGGTCCAGCTCGCCGGGCTCGCCGTGC AGAACTTCGTCTCGGCGGCGGTCGGCATCGCGGTGGCCATCGCGCTCGTCCGCGGCTTCGCCCGCACCCGCACCGGCACG ATCGGCAACCTCTGGGTCGACCTGATCCGCGGATCCCTCCGCCTGCTGCTCCCCCTCTCGCTCGTCACCGCAGTGATCCT CATCGCCGGCGGCGTGATCCAGAACTTCGCCGGCTTCCAGGACGTGGCGACCCTCGCGGGCGGCTCGCAGACGATCCCGG GCGGGCCGGTGGCCTCGCAGGAGGCGATCAAGATGCTCGGCACGAACGGCGGCGGCTTCTTCAACGCGAACTCCGCGCAC CCGTTCGAGGACCCGACCGCCTGGACGAGCGCGTTCCAGGTGATCCTGATGCTCGCGATCCCGTTCTCGCTCCCCCGCAC CTTCGGGAAGATGGTCGGCGACACCCGCCAGGGCACGGCGATCGTGGCCGTCATGGCGACGATCTTCGTGGTCTCCTTCA CCGCGCTCACGATCTTCGAGCTGAACGGCCAGGGCACGGCCCCAATGGCCGCCGGCGGCGCGATGGAGGGCAAGGAGCAG CGCTTCGGCATCATCGCCTCGACGCTGTTCGGATCCGCGTCGACGCTCACCTCGACGGGCGCGGTCAACTCGATGCACGA CTCGTACACGGCGCTCGGCGGCATGATGCCGATGATCAACATGATGCTCGGCGAGGTCGCCCCCGGCGGCACCGGCTCGG GCCTCTACGGCATGCTCATCCTCGCCGTGATCTCGGTGTTCGTCGCGGGCCTGCTCGTCGGCCGCACGCCCGAGTACCTC GGCAAGAAGATCGGGCCGCGCGAGATCAAGCTCGCGAGCCTGTACATCCTCGTCACGCCGATCCTCGTGCTCGTCGGCAC CGCGCTCAGCTTCGCGATCCCCGCCGTCCGCGACGACGTGGAGGGCACCTCGATCCTCAACAGCGGCCTGCACGGCCTGT CCGAGGTGGTCTACGCGTTCACCTCGGCGGCCAACAACAACGGATCCGCGTTCGCCGGCCTCACCGCCTCGACGCCGTGG TTCAACACGGCGCTCGGCGTCGCCATGCTGCTCGGGCGGTTCCTCCCGATCGTGTTCGTGCTGGCGCTCGCCGGATCCCT CGCGGCGCAGGACCGCATCCCCACCACATCGGGGACCCTGCCCACCCACCGGCCGCAGTTCGTCGGCCTCCTCATCGGGG TGACGGTCATCGTGACCGCTCTCACCTACTTCCCCGTTCTCGCGCTGGGTCCCCTGGCGGAAGGGCTCGCATCATGA Protein sequence : MDTLAGILQVASVVLVLVLIHRPLGDLMARMYESRHDSRVERGIYRLIGVDPRSEQTWPAYLRAVLAFSLVGVLVVYGLQ RLQAFLPYALGLPAVPEGLSFNTAVSFVTNTNWQSYSPEATMGYTVQLAGLAVQNFVSAAVGIAVAIALVRGFARTRTGT IGNLWVDLIRGSLRLLLPLSLVTAVILIAGGVIQNFAGFQDVATLAGGSQTIPGGPVASQEAIKMLGTNGGGFFNANSAH PFEDPTAWTSAFQVILMLAIPFSLPRTFGKMVGDTRQGTAIVAVMATIFVVSFTALTIFELNGQGTAPMAAGGAMEGKEQ RFGIIASTLFGSASTLTSTGAVNSMHDSYTALGGMMPMINMMLGEVAPGGTGSGLYGMLILAVISVFVAGLLVGRTPEYL GKKIGPREIKLASLYILVTPILVLVGTALSFAIPAVRDDVEGTSILNSGLHGLSEVVYAFTSAANNNGSAFAGLTASTPW FNTALGVAMLLGRFLPIVFVLALAGSLAAQDRIPTTSGTLPTHRPQFVGLLIGVTVIVTALTYFPVLALGPLAEGLAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 5e-68 | 45 |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 7e-68 | 45 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 9e-59 | 41 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-58 | 41 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-58 | 41 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-58 | 41 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 1e-58 | 41 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-59 | 41 |
