|
Name : fecD1 (CMM_2351) Accession : YP_001223096.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Virulence Product : putative Fe3+-siderophore ABC transporterpermease Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG4779 EC number : - Position : 2650355 - 2651407 bp Length : 1053 bp Strand : + Note : putative Fe3+-siderophore ABC transporter, permease component (NP_535687.1| ABC transporter, membrane spanning protein [iron] [Agrobacterium tumefaciens str. C58]; CAF19213.1| cobalamin/Fe3+-siderophores transport system,permease component [Corynebacteriu DNA sequence : GTGAGCGCAGGATCCGTCCCCGCGGTCGCCGGACGCCGCGCGACGACCACGCGTCGGGCCCGGACGCCGGCGCGCGTCCG GATCCTCGCGGTCGCCGTCGCCCTGCTCGTCGCGATCGCCGCCCTCGGCGCGGTCGCCGCCATGACCGGCGACTTCCCGG TGGCGCTCCCGGACCTGGTCGGCTCCCTCACCGGATCGACCACGGGCCTCCCCCGCACCGTCGTGCTCGAGTGGCGCATG CCGCGCATCGCCGCGGCCGTGGTCGTCGGGCTCGCGCTCGGCGTCGCGGGCGCGCTCTTCCAGGGGGTCACGCGGAACCC CCTGGCGAGCCCCGACATCCTCGGGCTCTCCAACGGCGCCTTCGTCGGCATGCTCGGCGCGGTGGTCCTCGTCGGATCCT CGTGGGAGTCCCGCACGGTCGGCGCGCTCGCCGGTGGGCTCGCGGCGGCGCTCCTCATCGCGCTGCTGGCGTCGGGCACC GGGGCGGGTGGCTTCCGCTTCATCGTCGTCGGGATCGCCATCTCCTCCATGGCGGCGTCGCTCGGCACGTGGCTGCTGCT GCGGGTCGAGCTCGACGTGGCCATGACCGCGTCGGCGTGGGGCGCGGGGACGCTCGCGGGCGTCGACGCGACGGGCGTGG GCACAGCCGCCGCGTCGACGGCCGTGCTGCTGTGCGCGGTGCCCGTCATCTCGCCCGCGCTCCGGCAGCTGGAGCTCGGC GACGACCTCGCCGCCGCGACGGGCGTGCGCGTCGCCCGGATGCGGCTGGCCGCGCTCGGCGTCGGCGTCGCCCTGGTGTG CGTCGCGACCACCGTCGCGGGGCCGGTGGCGTTCATCGCGCTGGCCGCGCCGCAGATCGCGCGCCGCCTGACGCGGACGC CGCACATCCCCGCGGCGGTCGCGGCCCTCGTCGGCGCGGCGCTCCTCCTCGGGGCCGACCTCGTGGCCCAGCACGCGCTC CCGATGACGGTGCCGGTCGGGGTCGTCACGGTGGTGATCGGCGGCTGCTACCTCGTGGGGCTGCTGGTCGCGGAGATCCG CCGCCGCCGCTGA Protein sequence : MSAGSVPAVAGRRATTTRRARTPARVRILAVAVALLVAIAALGAVAAMTGDFPVALPDLVGSLTGSTTGLPRTVVLEWRM PRIAAAVVVGLALGVAGALFQGVTRNPLASPDILGLSNGAFVGMLGAVVLVGSSWESRTVGALAGGLAAALLIALLASGT GAGGFRFIVVGIAISSMAASLGTWLLLRVELDVAMTASAWGAGTLAGVDATGVGTAAASTAVLLCAVPVISPALRQLELG DDLAAATGVRVARMRLAALGVGVALVCVATTVAGPVAFIALAAPQIARRLTRTPHIPAAVAALVGAALLLGADLVAQHAL PMTVPVGVVTVVIGGCYLVGLLVAEIRRRR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| fagB | YP_005682398.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 3e-16 | 45 |
| fagB | YP_003782431.1 | integral membrane protein | Not tested | PiCp 1 | Protein | 3e-16 | 45 |
| fagB | YP_005684489.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 3e-16 | 45 |
| fagB | YP_005680308.1 | Iron-enterobactin transporter | Virulence | PiCp 1 | Protein | 2e-16 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fecD1 | YP_001223096.1 | putative Fe3+-siderophore ABC transporterpermease | VFG0928 | Protein | 4e-18 | 42 |
