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Name : CMM_2188 (CMM_2188) Accession : YP_001222933.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Resistance Product : SSS family transporter membrane protein Function : - COG functional category : R : General function prediction only COG ID : COG4147 EC number : - Position : 2482974 - 2484596 bp Length : 1623 bp Strand : + Note : conserved membrane protein, putative transporter of the SSS family (ZP_00293132.1| COG4147: Predicted symporter [Thermobifida fusca]; NP_939157.1| Putative transport membrane protein [Corynebacterium diphtheriae NCTC 13129]). pfam00474, SSF, Sodium:solute DNA sequence : GTGATCGCGCCGGGCACGGCCCTCATGGCGACGACGCCCACGACCGACACGGGCGATCCCGTCCTCAACATCTCGATCTT CGGGGCGTTCGTGGTCATCACGCTCGTGATCGTGTTCCGCGCGAGCCGGAACAACTCGACCGCCGCGGACTACTACGCGG CCGGCCGCTCGTTCACCGGACCGCAGAACGGCACCGCCATCGCGGGCGACTACCTCTCCGCGGCGTCGTTCCTCGGGATC GTCGGCGCCATCGCCATCAACGGGTACGACGGGTTCCTCTACTCGATCGGGTTCCTGGTCGCGTGGCTCGTCGCGCTGCT GCTCGTGGCGGAGCTCATGCGCAACACGGGCAAGTTCACGATGGCCGACGTGCTGAGCTTCCGCCTGAAGCAGCGGCCGG TGCGTCTCGCGGCGGCGACCACGACGCTCGCGGTCTGCTTCTTCTACCTGCTCGCGCAGATGGCGGGCGCGGGCGGCCTG GTCTCGCTGCTGCTCGGGATCGACGACCGGCTCGGGCAGTCGCTCGTGATCGCCGTCGTGGGCGCGCTGATGATCGTCTA CGTGCTCGTGGGCGGGATGAAGGGCACGACCTGGGTGCAGATCATCAAGGCGTGCCTGCTCATCGCGGGCGCCGCGGTCA TGACCGTGTGGGTCCTGGCGATCCACGGCTTCAACATCTCGGAGCTGCTCGGCGCCGCGGCGGCGGCCGCGGACAAGCCC GTGCTGGAGCCCGGCAACCAGTACGGGGCCACGGGCATCACGAAGCTCGACTTCCTGTCGCTCGCGCTCGCGCTGGTGCT CGGGACGGCGGGGCTCCCCCACGTGCTCATGCGCTTCTACACGGTGCCGACCGCGAAGGAGGCGCGTCGCAGCGTCGTCT GGGCGATCTGGCTCATCGGGATCTTCTACCTCTTCACCCTGGTGCTCGGGTACGGCGCGGGCGCGCTGCTCGGGAGCGAG CGGATCCTCGCGGCGCCCGGCGGCGTGAACTCCGCCGCTCCCCTGCTGGCGCTCGAGCTCGGCGGGCCGATCCTGCTCGG GATCATCGCGGCGGTCGCGTTCGCCACGATCCTGGCGGTGGTCGCGGGTCTCACCATCACGGCGGCGGCGTCCTTCGCGC ACGACGTGTACGGCAGCGTCATCAAGAAGGGGCAGGTCTCGGCCAACGGCGAGGTGCGGGTCGCGCGGATCACAGTCGTC GTGATCGGCATCGTCTCGATCATCGCGGGCATCGGCGCCAACGGGCAGAACGTCGCGTTCCTCGTGGCGCTCGCGTTCGC GGTGGCCGCGAGCGCGAACCTGCCGACCATCCTGTACTCCCTCTACTGGCGGCGGTTCTCCACGCGGGGCGCGGTGCTGA GCATGTACGGGGGGCTCGGGACGGCGCTCGTGCTGATCGCGTTCTCGCCCGTCGTGTCGGGTGCGGAGACGTCGATGATC CCGGGGGCCGACTTCTCGTGGTTCCCCCTGAGCAACCCGGGGATCGTGTCGATCCCCGTCGGGTTCCTGCTCGGCTGGAT CGGGACGGTGACCTCCACGCGCAAGGAGGACCCGCTCGTCGCGGCGGAGATGGACGTCAGGTCGCTCACCGGGCACGGCG CCGAGAAGGCGACGGAGCACTAG Protein sequence : MIAPGTALMATTPTTDTGDPVLNISIFGAFVVITLVIVFRASRNNSTAADYYAAGRSFTGPQNGTAIAGDYLSAASFLGI VGAIAINGYDGFLYSIGFLVAWLVALLLVAELMRNTGKFTMADVLSFRLKQRPVRLAAATTTLAVCFFYLLAQMAGAGGL VSLLLGIDDRLGQSLVIAVVGALMIVYVLVGGMKGTTWVQIIKACLLIAGAAVMTVWVLAIHGFNISELLGAAAAAADKP VLEPGNQYGATGITKLDFLSLALALVLGTAGLPHVLMRFYTVPTAKEARRSVVWAIWLIGIFYLFTLVLGYGAGALLGSE RILAAPGGVNSAAPLLALELGGPILLGIIAAVAFATILAVVAGLTITAAASFAHDVYGSVIKKGQVSANGEVRVARITVV VIGIVSIIAGIGANGQNVAFLVALAFAVAASANLPTILYSLYWRRFSTRGAVLSMYGGLGTALVLIAFSPVVSGAETSMI PGADFSWFPLSNPGIVSIPVGFLLGWIGTVTSTRKEDPLVAAEMDVRSLTGHGAEKATEH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1523 | YP_001800917.1 | transporter | Not tested | Not named | Protein | 3e-94 | 65 |
| unnamed | AAK01502.1 | putative amino acid transport protein | Not tested | PAGI-1 | Protein | 2e-35 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CMM_2188 | YP_001222933.1 | SSS family transporter membrane protein | BAC0564 | Protein | 1e-46 | 46 |
| CMM_2188 | YP_001222933.1 | SSS family transporter membrane protein | BAC0570 | Protein | 8e-41 | 43 |
