Gene Information

Name : CMM_2032 (CMM_2032)
Accession : YP_001222774.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2294598 - 2295305 bp
Length : 708 bp
Strand : -
Note : putative ABC transporter, ATPase component (ZP_00225680.1| COG1136: ABC-type antimicrobial peptide transport system, ATPase component [Kineococcus radiotolerans SRS30216]; NP_811407.1| ABC transporter,ATP-binding protein [Bacteroides thetaiotaomicron VPI-

DNA sequence :
ATGAGCCTCATCCGCCTCGAGCAGGTGACCCGCACGGTCGAGCGGCCGGACGACGAGCCGCTGACGATCCTGCACGGCGT
CGACCTCGACGTGTCCGTGGGCGACCACGTCTCGATCGTGGGCCGGTCGGGGTCCGGGAAGTCGACGTTGCTGAACATCC
TGGGCCTGCTCGACACCCCGACCACCGGCGAGGTCTACCTCGACGACGTGCCGATGGCCCGCGTCTCGGGTTCCCGGCGC
GACCGGGCCCGCGGGGGCGACATCGGGTTCATCTTCCAGCAGTTCAACCTGCTGCAGGGCCGCACGGCGCGGGAGAACGT
GATGACCCCGCTGCTCTACTCGACGGGCCGCTCGTTCTGGCGGCGGGCCTCGATCGCGGCGGACATGCTCGAGCGGGTCG
GACTCGGTCACCGCGTCGACTCGATGCCGGAGACGATGTCCGGCGGCGAGCAGCAGCGCGTCGCCATCGCACGAGCCCTG
GTGCGGTCGCCGCGGCTGATCCTCGCCGACGAGCCCACGGGCGCGCTCGACATCGAGACCGGCGCCACGGTGATGACGCT
GCTCGCGGAGGTCGCGCACGCGTCCGGCACCGCGCTGGTCACGATCACGCACGACCCGACCGTCGCGGCCCGCGCCGATC
GGCACCACCGGCTGGAGGCGGGCGTGCTCGCGCCCGCCGAGGCCCTCACCCGCGGGGTGCTCGCATGA

Protein sequence :
MSLIRLEQVTRTVERPDDEPLTILHGVDLDVSVGDHVSIVGRSGSGKSTLLNILGLLDTPTTGEVYLDDVPMARVSGSRR
DRARGGDIGFIFQQFNLLQGRTARENVMTPLLYSTGRSFWRRASIAADMLERVGLGHRVDSMPETMSGGEQQRVAIARAL
VRSPRLILADEPTGALDIETGATVMTLLAEVAHASGTALVTITHDPTVAARADRHHRLEAGVLAPAEALTRGVLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-29 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-29 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-29 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CMM_2032 YP_001222774.1 putative ABC transporter ATPase NC_012469.1.7686878. Protein 5e-41 44
CMM_2032 YP_001222774.1 putative ABC transporter ATPase NC_008702.1.4606598. Protein 2e-25 43
CMM_2032 YP_001222774.1 putative ABC transporter ATPase CP001581.1.gene598.p Protein 3e-27 42