Gene Information

Name : clvF (CMM_1964)
Accession : YP_001222706.1
Strain : Clavibacter michiganensis NCPPB 382
Genome accession: NC_009480
Putative virulence/resistance : Unknown
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 2217881 - 2218780 bp
Length : 900 bp
Strand : -
Note : putative ABC transporter, ATP-binding protein (CAB60255.1| MrsF protein [Bacillus sp. HIL-Y85/54728]; ZP_00099614.1| COG1131: ABC-type multidrug transport system, ATPase component [Desulfitobacterium hafniense]). PUTATIVELY INVOLVED IN IMMUNITY TO LANTIBI

DNA sequence : 
ATGAGCGCCGTCATCGCCACCCGCGGGCTCACCAAGCGGTTCCGGGATCACGTCGCCGTCGACGCGCTCGACATCGAGGT
GCCGCAGGGGTCCGTGTACGGGTTCCTCGGGCCCAACGGCTCCGGCAAGTCCACGACCATGAAGATGCTGCTCGGGCTCA
CGCAGCCCACGTCGGGCGAGATCCACCTGTTCGGCCAGCGGCTCACGCCGGCGACGCGCGGCGGGCTCCTGCCGTCCATC
GGCTCCATGATCGAGGCGCCCGCCGGCTACGGCCACCTCACGGGGTGGGAGAACATGCGGATCGTGCGCGACATGCTCGG
GCTCGCGGAGGCCCAGGTGGAGCGGGCGTTCGCGACCGTGCGGCTCACGCAGCACCGCGACAAGCTGGTGCGCCGGTACT
CGCTCGGAATGAAGCAGCGGCTGGGGATCGCCATGGCCCTCGCCCGCGACCCCTCGCTGCTCGTCCTCGACGAGCCCACC
AACGGGCTGGATCCGGCGGGCATCGAGGAGGTCCGCTCCCTCCTCATGGACCTGGCCGGCCAGGGCATCACCGTGATGGT
CTCCAGCCACCTCCTCGACGAGATCGAGAAGATGGCGGGCGTGCTCGGCATCCTGGCCGACGGCCGGATGATCTTCCAGG
GCACGCGCGCCGAGCTGTTCGAGCACTCCATCCCCGACCTCGTCATCGAGACGTCCGCGCCGGACCGGGCCATGGCGGAG
GTCGCCGGGGCGGCCAGGAGCCCGGAGGGGATCCGGCTCAGCGCCCGCTCCAAGGACGAGACCGCGGACATCGTGCGCCG
GCTCGTGGCGGCCGACGTGCCCGTGCACGAGGTGCGGCGGCTGCCGCAGAGCCTGGAGGACGTGTTCATGGACATCACCG
GGCGCGGGGGGCAGCTGTGA

Protein sequence : 
MSAVIATRGLTKRFRDHVAVDALDIEVPQGSVYGFLGPNGSGKSTTMKMLLGLTQPTSGEIHLFGQRLTPATRGGLLPSI
GSMIEAPAGYGHLTGWENMRIVRDMLGLAEAQVERAFATVRLTQHRDKLVRRYSLGMKQRLGIAMALARDPSLLVLDEPT
NGLDPAGIEEVRSLLMDLAGQGITVMVSSHLLDEIEKMAGVLGILADGRMIFQGTRAELFEHSIPDLVIETSAPDRAMAE
VAGAARSPEGIRLSARSKDETADIVRRLVAADVPVHEVRRLPQSLEDVFMDITGRGGQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cdd4 CAA63569.1 - Not tested PaLoc Protein 9e-59 44