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Name : ctaD (CMM_1841) Accession : YP_001222583.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : putative cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 2080256 - 2082001 bp Length : 1746 bp Strand : - Note : putative cytochrome c oxidase subunit I (NP_827224.1| putative cytochrome c oxidase subunit I [Streptomyces avermitilis MA-4680]; ZP_00293766.1| COG0843: Heme/copper-type cytochrome/quinol oxidases,subunit 1 [Thermobifida fusca]). pfam00115, COX1,Cytochro DNA sequence : GTGACATCGACACTCAACCGTCCCACCGCGATCCCCGCGGGACAGGCGAAGGTCCTCGAGAACTCCGGCAAGGCCGAACG GCGTGGGAACGTCGTGGTCAACTGGATCACCTCCACGGACCACAAGACCATCGGGTACCTGTACCTCATCACCTCGTTCC TCTACTTCTGCCTGGGCGGCGTGATGGCCCTCGTGATCCGCGCGCAGCTCTTCGAGCCGGGCCTGCACGTCGTGGAGACG AAGGAGCAGTACAACCAGCTCTTCACCATGCACGGCACGATCATGCTGCTCATGTTCGCGACGCCGCTCTTCGCCGGCTT CGCCAACGTGCTCATGCCGCTGCAGATCGGCGCTCCTGACGTCGCGTTCCCGCGACTCAACGCCTTCGCGTACTGGCTGT TCAACTTCGGCTCGCTGATCGCGGTCGCCGGATTCCTCACCCCGGCCGGAGCGGCCTCGTTCGGGTGGTTCGCCTACGCC CCGCTGTCGAGCACGACGTTCTCGCCAGGGTTGGGCGGCAATCTCTGGGTGATGGGCCTCGCGCTCAGCGGCTTCGGCAC CATCCTCGGCGCGGTCAACTTCGTGACGACCATCATCACGATGCGCGCGCCCGGCATGACGATGTTCCGCATGCCGATCT TCACGTGGAACATCCTCGTGACGTCGATCCTCGTGCTCATGGCGTTCCCGGTCCTCGCAGCCGCGCTCTTCGGCCTCGGC GCCGACCGCATATTCGACGCGCACATCTACGACCCGGCGAACGGCGGCGCCATCCTCTGGCAGCACCTCTTCTGGTTCTT CGGGCACCCCGAGGTGTACATCATCGCGCTGCCGTTCTTCGGCATCGTCTCCGAGGTGTTCCCGGTCTTCAGCCGCAAGC CGATCTTCGGGTACAAGACCCTCGTGTACGCGACCATCTCCATCGCGGCCCTCTCGGTCACGGTGTGGGCGCACCACATG TACGTCACCGGGTCCGTCCTGCTGCCGTTCTTCTCGCTCATGACCATGCTCATCGCGGTCCCCACCGGCGTGAAGATCTT CAACTGGATCGGCACGATGTGGCGTGGTTCGGTCACGTTCGAGACGCCCATGCTGTGGGCCATCGGCTTCCTCATCACGT TCACGTTCGGCGGCCTGACCGGCGTCATCCTGGCGTCGCCCCCGCTCGACTTCCACGTGTCCGACACGTACTTCGTGGTG GCGCACTTCCACTACGTGGTGTTCGGCACCGTCGTGTTCGCCATGTTCTCCGGCTTCTACTTCTGGTGGCCCAAGTGGAC GGGCACGATGCTCAACGAGCGCCTCGGCAAGGTCCACTTCTGGCTGCTGTTCGTCGGCTTCCACACCACGTTCCTCATCC AGCACTGGCTGGGGGTCATGGGCATGCCGCGTCGTTACGCGACCTATCAGCCCGAGGACGACTTCACGTGGATGAACCAG CTGTCCACGATCGGCGCCGGCATCCTCGCGCTGTCGATGATCCCGTTCTTCCTGAACGTCTGGATCACCGCGCGCACGGC GCCCCGCGTGACCGTGAACGACCCCTGGGGCTATGGCCGCTCGCTCGAGTGGGCGACCTCCTGCCCGCCGCCGCGGCACA ACTTCACGTCCATCCCGCGGATCCGCTCGGAGGCCCCGGCCTTCGACCTGAACCACCCCGAGGCGGGCATCCCCGTGGGA ATCGGTCCGGCGAAGGACGCTCCCGATGCCGCGACCTACGACATCTCCAGCGACAAGGTGAAGTGA Protein sequence : MTSTLNRPTAIPAGQAKVLENSGKAERRGNVVVNWITSTDHKTIGYLYLITSFLYFCLGGVMALVIRAQLFEPGLHVVET KEQYNQLFTMHGTIMLLMFATPLFAGFANVLMPLQIGAPDVAFPRLNAFAYWLFNFGSLIAVAGFLTPAGAASFGWFAYA PLSSTTFSPGLGGNLWVMGLALSGFGTILGAVNFVTTIITMRAPGMTMFRMPIFTWNILVTSILVLMAFPVLAAALFGLG ADRIFDAHIYDPANGGAILWQHLFWFFGHPEVYIIALPFFGIVSEVFPVFSRKPIFGYKTLVYATISIAALSVTVWAHHM YVTGSVLLPFFSLMTMLIAVPTGVKIFNWIGTMWRGSVTFETPMLWAIGFLITFTFGGLTGVILASPPLDFHVSDTYFVV AHFHYVVFGTVVFAMFSGFYFWWPKWTGTMLNERLGKVHFWLLFVGFHTTFLIQHWLGVMGMPRRYATYQPEDDFTWMNQ LSTIGAGILALSMIPFFLNVWITARTAPRVTVNDPWGYGRSLEWATSCPPPRHNFTSIPRIRSEAPAFDLNHPEAGIPVG IGPAKDAPDAATYDISSDKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-155 | 67 |
