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Name : tktA (CMM_1734) Accession : YP_001222477.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 1959514 - 1961604 bp Length : 2091 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : GTGGCAGCATTGCAATGGGACCCCATCGACAGCAAGGCGGTCGACACCGCACGTATCCTCGCCGCGGACGCGGTGGAGAA GGTCGGAAACGGTCACCCCGGCACCGCCATGAGCCTGGCCCCGGCGGCCTACCTCCTGTTCCAGAAGGTCATGCGCCGCG ACCCGTCCGACAGCACCTGGATCGGTCGCGACCGGTTCATCCTCTCGGTGGGCCACAGCTCGCTCACGCAGTACACGCAG TTCTTCCTCGGCGGCTATGGCCTCGAGATCGAGGACCTCCAGGCCCTCCGCACGTGGGACTCCAAGACCCCGGGCCACCC GGAGTACGGCCACACCGACGGCGTCGAGATCACCACCGGCCCCCTCGGCCAGGGCCTCGCCTCCTCCGTGGGCTTCGCCT ACGCCGCCCGCTACGAGCGCGGCCTGTTCGACCCCGAGACCCCCGCGGGCGAGAGCCCCTTCGATCACTTCGTGTACGTG ATCGCCGGCGACGGCGACATGCAGGAGGGCATCACCTCCGAGGCCTCCTCCCTCGCGGGGCACCAGGAGCTCGGCAACCT CATCGCGATCTACGACAGCAACCAGATCTCCATCGAGGACGACACCGACATCGCCTTCACCGAGGACGTGGCCGCGCGCT ACGAGGCCTACGGCTGGCACGTGCAGCACGTCGACTGGAAGAAGACGGGCGAGTACGTCGAGGACGTGCAGGAGCTGTTC GACGCCGTCGAGGCCGCCAAGGCCGAGACGCGGAAGCCCTCGCTGATCATCCTCAAGACGATCATCGGCTGGCCCTCCCC GAAGAAGCAGAACTCGGGCAAGATCCATGGCTCCGCCCTCGGCGCCGAGGAGCTCGCGGCCGTCAAGCAGATCGTCGGCT TCGACCCCGAGAAGAGCTTCGAGGTGCCGGACGGCGTCCTCGAGCACACCCGCCAGGCCGTCGAGCGCGGCCAGCAGCAG CACCGCGAGTGGGACGAGAAGCTCGCCGCGTGGGCCGAGGCGAACCCCGAGCGCAAGACGTTGCTCGACCGCGTCCTCGC CGGCGACGCCCCCGAGGGCCTCGACGAGGCGCTCCCCGTGTTCCCCGCGGGCAAGGACGTCTCGACGCGCGCCGCGTCCG GCAAGGTCATCAACGCCATCGCCGAGGTCATGCCCGAGCTGTGGGGCGGCTCCGCCGACCTCGCCGAGTCGAACAACACG ACCATCGAGTCGGCACCGTCGTTCGTCCCCGCCGAGCGCTCGACCGACATGTGGAAGGGCGACCCCTACGGCCGCGTCCT CCACTTCGGCATCCGCGAGCACGCCATGGGCGCGATCCTCAACGGCATCGTCCTGCACGGCAACACGCGTCCCTTCGGCG GCACGTTCCTCATCTTCAGCGACTACATGCGCCCGGCCGTCCGTCTCGCCGCGCTCATGAAGGCGCCGTCGATCTTCGTC TGGACGCACGACTCCGTCGCCCTCGGTGGCGACGGCCCGACGCACCAGCCGGTGGAGCAGCTCGCCAGCCTCCGCGCCAT CCCGGGCCTCGACGTCATCCGCCCCGCGGACGCCAACGAGACCGCGCAGGCGTGGAAGACGATCCTCACGCGTCGCATGG GCCCCGCGGGCCTCGCGCTCTCGCGCCAGAACCTCCCGGTCCTGGAGCGCGGCGCGGGCGACGCCACGGCCACCGAGTTC GCCTCGGCGGCCGGCGTGGCCAAGGGCGCCTACATCCTGGCCGACACCGAGGGCACGCCCGACGTGATCCTCATCGCCAC GGGCTCCGAGGTCCAGTTCGCCGTCGAGGCCCGCGAGGCCCTCGCCGCGGACGGCGTCCAGGCCCGAGTGGTCAGCGCCC CGAGCCTCGAGTGGTTCGAGGAGCAGGACGCCGAGTACAAGGAGCACGTGCTCCCCGAGGCGGTCGCCGCGCGCGTCTCC GTCGAGGCGGGCATCTCGCTCTCCTGGAAGCAGTACGTCGGGCACCACGGCCGCAGCATCTCGATCGAGCACTTCGGCGC CAGCGCCGAGTACGAGGTCCTGTACCGCGAGTTCGGCATCACCACGGAGGCCGTCGTGAAGGCGGCCAAGGAGTCCATCG CCTCCCTCTAG Protein sequence : MAALQWDPIDSKAVDTARILAADAVEKVGNGHPGTAMSLAPAAYLLFQKVMRRDPSDSTWIGRDRFILSVGHSSLTQYTQ FFLGGYGLEIEDLQALRTWDSKTPGHPEYGHTDGVEITTGPLGQGLASSVGFAYAARYERGLFDPETPAGESPFDHFVYV IAGDGDMQEGITSEASSLAGHQELGNLIAIYDSNQISIEDDTDIAFTEDVAARYEAYGWHVQHVDWKKTGEYVEDVQELF DAVEAAKAETRKPSLIILKTIIGWPSPKKQNSGKIHGSALGAEELAAVKQIVGFDPEKSFEVPDGVLEHTRQAVERGQQQ HREWDEKLAAWAEANPERKTLLDRVLAGDAPEGLDEALPVFPAGKDVSTRAASGKVINAIAEVMPELWGGSADLAESNNT TIESAPSFVPAERSTDMWKGDPYGRVLHFGIREHAMGAILNGIVLHGNTRPFGGTFLIFSDYMRPAVRLAALMKAPSIFV WTHDSVALGGDGPTHQPVEQLASLRAIPGLDVIRPADANETAQAWKTILTRRMGPAGLALSRQNLPVLERGAGDATATEF ASAAGVAKGAYILADTEGTPDVILIATGSEVQFAVEAREALAADGVQARVVSAPSLEWFEEQDAEYKEHVLPEAVAARVS VEAGISLSWKQYVGHHGRSISIEHFGASAEYEVLYREFGITTEAVVKAAKESIASL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 3e-123 | 45 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 2e-121 | 44 |
