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Name : CMM_0093 (CMM_0093) Accession : YP_001220832.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : RND family transporter Function : - COG functional category : R : General function prediction only COG ID : COG2409 EC number : - Position : 135959 - 138130 bp Length : 2172 bp Strand : - Note : putative exporter of the RND family (ZP_00229024.1| COG2409: Predicted drug exporters of the RND superfamily [Kineococcus radiotolerans SRS30216]; NP_631580.1| putative integral membrane protein. [Streptomyces coelicolor A3(2)]). InterPro: HMGCR/Patched 5 DNA sequence : GTGTCCGCACTTCTCTACCGCCTTGGCGTGCTGTCCGCGCGCAGCCGCTGGGCAGTCGTCGCGAGCTGGCTGCTCGTCCT CCTGATCGCCGCGGGTGTCGCCCTTTCCGGTATGCGCTTCTCCAGCGCAGGGTTCGATGTCCCCGGCACCGACTCCAGCC GCGCGTTGAGCACCCTCGAGTCGGAGTTCCCCACTACCGGTGAGGCGACGACGTCGCTCCAGCTCGTTGTCCAGTCGTCC GGAGGACGTGTCACGGATGACGCACCCTCACTCACGTCAGCCTTGGAGCAGGCGCGTGTGATCCCCGGTGTGCTCGCGGT CACCGACCCCCTGGACCCCGCGCGACCCTCGATCTCCGCTGACGGTGCGACCGCCATCGCGCAGGTGACCGTCGGCGACA TCGACGAGGAGCAGGCGGACGAGGTGACGTCCGAGCTCGACGCCGTCGCCGCTGGTCTGCGCGACCAGGGCATGGCCGCG GAGATCGGCGGCTCACTGACCAGCGCAGTACCCGAGATCCTCGGTCCGACGGAGCTCGTCGGGGCCCTTGTGGCCTTCCT GGTCCTGCTGCTCACATTCGGCTCGCTGGTTGCAGCCGGAGCGAACATGCTCGGCGCCCTCGTCGGCGTCGGAGTCGGTG TCCTGGGCATCCTGGCCTTCTCGGCGATCGCCCCGATCGGTTCCGTGACCCCCATCCTCGCGGTGATGCTGGGGTTAGCC GTCGGGATCGACTACTGCCTCTTCGTGCTCTCGCGCTTTCGCGCCGAACTGCGTAGCGGGCGCCTTGTGCAAGACGCCAT CGGCCGGGCCACGGCCACGGCCGGCTCGTCTGTCGTCTTCGCTGGAGCGACGGTCATCATCGCGCTCGTAGGTCTCACCG TCGTCGGCATCCCGTTCCTCGGCGAGATGGGAATCGCGGCGGCGTTCGCGGTCGCTGTGGCTGTGCTGATGTCCCTGACC CTTCTGCCCGCCCTGCTGTCGTGGATGGGGCGGCGCGCCCTCGGGCGGCGGGAGCGCGCTTCGACCCGCTCAGCCGGGGG CTCCCCTCGCTGGACGACGACATGGATCGGTGCCGTCCTGCGTCGTCCCGTGATCGCGACGTTCGCGGTCGTCGGCGGTC TCGCCGTCGTGGCTCTTCCGTTGCTGGGCATGCAGACCAGTCTCGTCATCCCCGGCGGAGAGGATCCCGATTCCACTCAG CGGGCCGCCTACACGACGGTCGCTGACGCTTTCGGTCCGGGCGCGCAGGATCCCCTCGTCGTGCTGGTGCGATCGGATTC CGATGCCGCGTCAGCTGTCGAGACGGTCAGCACCGAACTCGGCTCGCTCCCGAATGTGGCCACCGTCTCCCCGGGTCCTG TCTCGGCCGACGGATCGACCGCCATGCTGACGGTCATCGCCGAATCCGGGCCGCTGGACACAGCCACGACCTCGCTGGTG AGAGACATCCGAGCGCTCGGCGACGATTCCACGAGCGTCCAGGTGACGGGTTCGACGGCGATCGCACTCGACTCGGACGA GCAGCTCCGCTCGGCTCTGATCGCCTATGTCGCACTGATCGTCGGGCTCTCCTTCTTGCTGCTCGTGCTGCTGTTTCGTT CCTTCCTCGTCCCGCTCATCGCCACCGGGGGCTTCCTCCTGTCGCTCGGGGCGGCACTCGGCTCGACCGTGGCGGTCTTC CAGTGGGGATGGCTCGACCCCATCGTCCAGGCCCCGCAGGGCAACCCTCTGCTGAGCCTCCTGCCGATCATCGTGACGGG GATCCTGTTCGGCCTGGCGATGGACTACCAGGTGTTCCTGGTATCCCGCATCCATGAGGCGCATCGCCACGGAACATCGC CCCGAGAGGCCGTACGCGCCGGCTTCCAGCAATCTGCACCTGTCGTGGTCGCTGCCGCGGCGATCATGGCCGCGGTCTTC TTCGGATTCGCGCTCAGCCCGTCCTCGCTGGTGGGATCCATCGCGTTGGCCCTCGCCGTAGGTGTGCTCGCCGACGCCCT CCTCGTCCGCATGATCCTCGTCCCGGCGCTGCTCACGCTCCTCGGCCGCTCCGCCTGGTGGATCCCACGCTGGCTCGACA AGCTCCTGCCGACGATCGACGTCGAGGGCGCCGCCTTCGACGACGACCGTCGTGAGGCCGCCCCGAATGAGCTGGCGTCG ACGAGAATGTGA Protein sequence : MSALLYRLGVLSARSRWAVVASWLLVLLIAAGVALSGMRFSSAGFDVPGTDSSRALSTLESEFPTTGEATTSLQLVVQSS GGRVTDDAPSLTSALEQARVIPGVLAVTDPLDPARPSISADGATAIAQVTVGDIDEEQADEVTSELDAVAAGLRDQGMAA EIGGSLTSAVPEILGPTELVGALVAFLVLLLTFGSLVAAGANMLGALVGVGVGVLGILAFSAIAPIGSVTPILAVMLGLA VGIDYCLFVLSRFRAELRSGRLVQDAIGRATATAGSSVVFAGATVIIALVGLTVVGIPFLGEMGIAAAFAVAVAVLMSLT LLPALLSWMGRRALGRRERASTRSAGGSPRWTTTWIGAVLRRPVIATFAVVGGLAVVALPLLGMQTSLVIPGGEDPDSTQ RAAYTTVADAFGPGAQDPLVVLVRSDSDAASAVETVSTELGSLPNVATVSPGPVSADGSTAMLTVIAESGPLDTATTSLV RDIRALGDDSTSVQVTGSTAIALDSDEQLRSALIAYVALIVGLSFLLLVLLFRSFLVPLIATGGFLLSLGAALGSTVAVF QWGWLDPIVQAPQGNPLLSLLPIIVTGILFGLAMDYQVFLVSRIHEAHRHGTSPREAVRAGFQQSAPVVVAAAAIMAAVF FGFALSPSSLVGSIALALAVGVLADALLVRMILVPALLTLLGRSAWWIPRWLDKLLPTIDVEGAAFDDDRREAAPNELAS TRM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CMM_0093 | YP_001220832.1 | RND family transporter | Not tested | chp/tomA region | Protein | 0.0 | 100 |
