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Name : deoA (CMM_0981) Accession : YP_001221722.1 Strain : Clavibacter michiganensis NCPPB 382 Genome accession: NC_009480 Putative virulence/resistance : Unknown Product : thymidine phosphorylase Function : - COG functional category : F : Nucleotide transport and metabolism COG ID : COG0213 EC number : 2.4.2.4 Position : 1127064 - 1128362 bp Length : 1299 bp Strand : + Note : Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate DNA sequence : GTGAGCGCCGCGTTCGACGTCGTCGACCTGATCCGCACCAAGCGCGACGGCGGACGCCTCTCGACCGCCGAGATCGACTG GCTCGTGGCGGCGTACACCGACCGCTACGTGGCGGACGAGCAGATGGCCGCGCTCGCGATGGCGATCCTGCTCCGCGGCA TGGACCGCGCCGAGATCCGCGACCTGACGCTCGCGATGATCGCCAGCGGCGAGACGCTCGACTTCTCGCAGCTCGGGAAG CCCACGGTCGACAAGCACTCCACGGGCGGCGTGGGCGACAAGATCACCCTCCCGCTCATGCCGCTGGTCGCCTCCTACGG CGTCGCGGTGCCGCAGCTCTCGGGCCGCGGCCTCGGCCACACGGGCGGCACGCTCGACAAGCTCGAGTCGATCCCCGGCT GGCGTGCCGACCTCTCGACGGAGGAGATGGTGCGCCAGATGCAGGACCACGGCGGCGTGATCTGCGCGGCCGGCAGCGGC CTCGCACCGGCGGACAAGCGCCTCTATGCGCTCCGCGACACCACCGGCACGGTCGAGGCGATCCCGCTCATCGCCTCGAG CATCATGAGCAAGAAGATCGCCGAGGGCACGGGCGCGCTCGTGCTCGACGTGAAGTTCGGATCCGGCGCCTTCATGACCG ACATCGACCGGTCGCGCGAGCTCGCGCGCACCATGGTCGAGCTCGGCACCGACGCCGGGGTGCGGACCACCGCGCTCCTC ACCGACATGGACGTGCCCCTCGGGCTCGCCATCGGCAACGCCAACGAGGTGCGCGAGTCCGTCGAGGTGCTCGCGGGCGG CGGCCCCGCCGACGTCGTGGAGCTCACGCTGGCGCTCGCGCGGGAGATGCTCGCCGCGGTCGGGATCCCCGACGCCGACG TCGAGGTCGCCCTCCGCGACGGCCGGGCCATGGACGCGTGGCGCGCCACCGTGCGCGCGCAGGGCGGGGACCCGGACGCC GCGATGCCCGTGGCGCGCGAGACCCATGTGGTCACCGCGGAGCGCGACGGCGTGCTCGTGCAGCAGGACGCCCTCCCGTT CGGCATCGCCGCCTGGCGCCTCGGCGCCGGACGCGCGCGCCAGGGCGACGCCGTGCAGCACGCCGCGGGCGTCGACCTGC ACGCCAAGCCGGGGGACCGCGTCCGCCGCGGCGACCCGCTGTTCACGCTCTCCACCGACGAGCCCGAGCGGTTCGCCCGC GCGCTGGAGTCGCTCGAGGGCGCGTACCGCGTCGGCGATCCGGAGGAGCACGTCGCGCGCGGCCCGCTCGTGCGGGAGCG CATCACCGCCGAGGGCTGA Protein sequence : MSAAFDVVDLIRTKRDGGRLSTAEIDWLVAAYTDRYVADEQMAALAMAILLRGMDRAEIRDLTLAMIASGETLDFSQLGK PTVDKHSTGGVGDKITLPLMPLVASYGVAVPQLSGRGLGHTGGTLDKLESIPGWRADLSTEEMVRQMQDHGGVICAAGSG LAPADKRLYALRDTTGTVEAIPLIASSIMSKKIAEGTGALVLDVKFGSGAFMTDIDRSRELARTMVELGTDAGVRTTALL TDMDVPLGLAIGNANEVRESVEVLAGGGPADVVELTLALAREMLAAVGIPDADVEVALRDGRAMDAWRATVRAQGGDPDA AMPVARETHVVTAERDGVLVQQDALPFGIAAWRLGAGRARQGDAVQHAAGVDLHAKPGDRVRRGDPLFTLSTDEPERFAR ALESLEGAYRVGDPEEHVARGPLVRERITAEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoA | YP_005163381.1 | Thymidine phosphorylase | Not tested | Not named | Protein | 9e-125 | 63 |
