Gene Information

Name : avhB8 (BBta_p0251)
Accession : YP_001220560.1
Strain :
Genome accession: NC_009475
Putative virulence/resistance : Virulence
Product : Type IV secretory pathway AvhB8 protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3736
EC number : -
Position : 184020 - 184691 bp
Length : 672 bp
Strand : -
Note : Evidence: Function of strongly homologous gene; PUBMED: 12169609

DNA sequence :
ATGGTCGGTCACGATGACCTGAAAGCCTATTTCGACAATGCGCGTCGATGGGAGCAGGATCTGCTGCTGGCGGCCCATCG
CTCGCGCAGAACGGCATGGGTGATTGCCGCGGGTGCCTGCGCATTAGCGATCGCCTCACTGAGTGCGGTCGCAGCGCTGG
CGCCGCTGAAGACGGTCGAACCGTTCGTCATCCGGGTCGATAACGCGACCGGGATTGTGGACACCGTCTCCGCCCTCACT
TCGACGCCGGCGCGCTATGATGAAGCGGTCACCAAGTATTTTCTTGGCCGCTACGTTCGCGCGCGCGAAGGCTACAGCTA
TCCGGAAGCCGAAACCAACTTCCGGACGATTTCGCTGCTCTCGGGGCAGGGCGAACAGGCCCGTTTTGCGGCCTGGTATC
GCGGCTCCAATCCGGAAAGCCCGCAAGTCGTTCAGGGCCGTTTCGGGGTCGCCACAGTACGGATCAAGGCGATCTCGCTC
CTAGCTGACAATGTCGCCTCGGTGCGTTTCATGAAAGAGAGCCGCAAGGGCGAGGAAACCCGCATCACCCACTGGGTCTC
CACCCTGACGTTCTCCTATACCAACGCGCCAATGTCCTCCGCCGACCGTCTTATCAATCCGCTCGGCTTTGTGGTCTCGG
AATATCGCGCCGATCCGGAGGTCGTGCCATGA

Protein sequence :
MVGHDDLKAYFDNARRWEQDLLLAAHRSRRTAWVIAAGACALAIASLSAVAALAPLKTVEPFVIRVDNATGIVDTVSALT
STPARYDEAVTKYFLGRYVRAREGYSYPEAETNFRTISLLSGQGEQARFAAWYRGSNPESPQVVQGRFGVATVRIKAISL
LADNVASVRFMKESRKGEETRITHWVSTLTFSYTNAPMSSADRLINPLGFVVSEYRADPEVVP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 2e-45 61
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 2e-48 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB8 YP_001220560.1 Type IV secretory pathway AvhB8 protein VFG2237 Protein 4e-47 54