Gene Information

Name : avhB9 (BBta_p0250)
Accession : YP_001220559.1
Strain :
Genome accession: NC_009475
Putative virulence/resistance : Virulence
Product : Type IV secretory pathway AvhB9 protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3504
EC number : -
Position : 183172 - 184023 bp
Length : 852 bp
Strand : -
Note : Evidence: Function of strongly homologous gene; Localization: 11 : Membrane; PUBMED: 12169609

DNA sequence :
ATGAAATCCTTCGTTCTCTTATTGATTTTTGCCCTGGGATTCGCAGGGCCGGTGCTGGCGCTGCAACAGCCCTCGCCAGG
CCAACACGACGCCCGGGTGCGCACCGTGACCTATGATCCGGCCAATGTGGTCCGGGTCAACGGCGTGATTCGGGCATCCA
CCCAGGTGTTGTTTGCCGACGATGAGGAGGTCGCGCATGTCGCGATTGGCGATGCGATCGCATGGGAAGTTGCACCAGCG
GGCTCGATCCTGTTCCTCAAACCGCGGGAAAAACATCCGCCGACCAACCTGCAGGTCGTCACCACGCGCCCGGATGGCCG
CAAGCGCTCGTATCAGTTCGAGTTGTCGATCGCCGAGACGACGCTGGCGGACAGCTATTTCGTCGTCCGCTTCGCCTATC
CCGGCGACGAGATCGAGCGTCGGCGTGCGGAGGCGGCCGCCCGTGGCGCGGAGCGGGAAGGCTCGCTGATAGACCAGACC
TTTGACCTGCATCATGCGTATGGGGCACGCAACTGGCGGTTTTCGGCACAAGGCTCGGTCGACCTCGAGCCCGAAGCCGT
TTTCGACGACGGCAAGGAGACCACGTTCCGCTTTGCGGGCAACCGTGAAATCCCCGCGATCTACCTAATCAATTCCGACG
GCTCCGAAAGCCTGGTGCCCAAGGATGTCCGCGGCGAGCTCGTGGTGGTTCATGCCACGGCCCGGGAGTTCCGGCTGCGC
AAAGGCGACAACGTCCTTTGCATTTTCAACGAAGCGTTCGATGCGGTGGGGATTAACCCTGGGACCAATACCACAAGCCC
CTCGATCGAGCGGCGGGCAAAGAAATCATCTCCAATCTCAAGGCCACGATAG

Protein sequence :
MKSFVLLLIFALGFAGPVLALQQPSPGQHDARVRTVTYDPANVVRVNGVIRASTQVLFADDEEVAHVAIGDAIAWEVAPA
GSILFLKPREKHPPTNLQVVTTRPDGRKRSYQFELSIAETTLADSYFVVRFAYPGDEIERRRAEAAARGAEREGSLIDQT
FDLHHAYGARNWRFSAQGSVDLEPEAVFDDGKETTFRFAGNREIPAIYLINSDGSESLVPKDVRGELVVVHATAREFRLR
KGDNVLCIFNEAFDAVGINPGTNTTSPSIERRAKKSSPISRPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB9 YP_001610349.1 VblB9 protein Virulence Not named Protein 8e-66 56
virB9 YP_001610005.1 VirB9 protein precursor Virulence Not named Protein 1e-65 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
avhB9 YP_001220559.1 Type IV secretory pathway AvhB9 protein VFG2238 Protein 2e-65 52