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Name : serS (COSY_0904) Accession : YP_001219732.1 Strain : Candidatus Vesicomyosocius okutanii HA Genome accession: NC_009465 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 941515 - 942804 bp Length : 1290 bp Strand : - Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAAGTAAAAAACAACTTAGATTAGACATGAAAGCTGTTGCTAATGCCTTAAAGAAGCGATATTTTTATTTTGATGT TGATCATTTAATTGAGTTAGAAAGTAATAGAAAAAAAAATCAAATTGAAACTCAGAATTTGCAAAATCTACGAAATATGC AGTCTAAGGCGATTGGAAAAGCTAAAGCTTCTGGCGAAGACATTAAGTCTTTATTAAAGAATGTTTCAGATTTAAGTACT AAGTTGAATTTGGCAAAATCAAATTTACAATTGATTCAATCTGAGATTGATGTAATTGTTTTATCGATGCCTAATATTCC TCATCATTCTGTACCTAATGGTAAAAGTGAAGAAGATAATATTGAGGTATCAAAATGGGGTAAATTAGTTAATTATGATT TTGATGTAAAAGACCATGTTGATTTGGGTGCGATGTATGGACTAGATTTTGAGACAGCAGTTAAGATTTCTGGTGCTAGA TTTTCTGTTATGACTGGGAAAATTGCACGTTTGCATCGTGCATTGACACAATTTATGTTAGATCGACATAGTGAAGTTAA TGGCTATACTGAGGCTTATGTGCCTTATTTAGTGAATACAGAATCCTTAATTGGCACAGGTCAGTTGCCAAAGTTTGAAG CTGATTTATTTAAAACATATTTGCATGGTGAGAAGGGGGAAACAAAGACATTGTATCTAATTCCAACTGGTGAAGTGCCC GTGACTAATATGATGCGTGATATGATTATAAAAGAGAATGATTTACCTCTTAAATTTGTGACTCATACACCTAGTTTTAG ATCAGAAGCAGGTAGTTATGGACGATATACTCGCGGCCTTATTCGTCAACACCAATTTGAAAAAGTTGAGTTAGTACAGG TAGTTAAAGCACAAGATTCGTACCAAGCTTTAGAAGTATTAACTACACATGCTGAAGATATCTTACAAGCATTAGAATTG CCTTATAGAAAAATTAGCTTATGTGCAGGAGACCTTGGTTTTTCTGCTACTAAAACCTATGATTTAGAAGTGTGGCTACC TGGACAAAATGTTTATTGTGAAATTTCTTCTTGTTCTTGTTTTGAAGACTTTCAGGCACGACGTTTGCAATTAAGGTATA AAAACAAAGAAACTAATAAATTAGAATTATTACACACATTAAATGGCTCAGGATTAGCAGTTGGTAGAACTTTAGTGGCG GTTTTGGAAAATCATCAGCAAGCTGATAGAAGTATTAAAATACCATTTGTTTTACAGAGTTATATGGGTGGTTTGGAAGT TATGAATTAA Protein sequence : MLSKKQLRLDMKAVANALKKRYFYFDVDHLIELESNRKKNQIETQNLQNLRNMQSKAIGKAKASGEDIKSLLKNVSDLST KLNLAKSNLQLIQSEIDVIVLSMPNIPHHSVPNGKSEEDNIEVSKWGKLVNYDFDVKDHVDLGAMYGLDFETAVKISGAR FSVMTGKIARLHRALTQFMLDRHSEVNGYTEAYVPYLVNTESLIGTGQLPKFEADLFKTYLHGEKGETKTLYLIPTGEVP VTNMMRDMIIKENDLPLKFVTHTPSFRSEAGSYGRYTRGLIRQHQFEKVELVQVVKAQDSYQALEVLTTHAEDILQALEL PYRKISLCAGDLGFSATKTYDLEVWLPGQNVYCEISSCSCFEDFQARRLQLRYKNKETNKLELLHTLNGSGLAVGRTLVA VLENHQQADRSIKIPFVLQSYMGGLEVMN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-90 | 49 |
