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Name : clpB (COSY_0716) Accession : YP_001219552.1 Strain : Candidatus Vesicomyosocius okutanii HA Genome accession: NC_009465 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease ATP-binding subunit ClpB Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 749621 - 752179 bp Length : 2559 bp Strand : + Note : - DNA sequence : ATGAATTTTGATAAACTAACTGCACAATTCCAACAAGACTTAAGTACTGCACAATCCATAGCTATTACAAAAAATCACAG TACCATAGAAGCAGTACATATTATAAGTAGTATGTTACAAAATAATAATAGTAGTGTTAATAATTTATTATCAAACATTG ATATTGATATTCATCAACTTAAACAAGAAACTGATAAAGAAATTAATACATTAGCCACGATCAGCAATCCAAGTGGTGAT GTTAATATTTCTCAGAACTTGTTACGTTTATTAAATCAGATGGAAAAATTAGCTCTCAATAAAAAAGATTCGTATCTATC AACTGAGATATTTTTATTGGCAATCATAAAAGGCAATGATACAACTACAAAACTTCTAAAAGCACATGGTGTAAATGAGA TTAATTTAAATCAAGCAATTGACAACCTTAGAGGAGGTAAAAACGTGAATAATCAAAACACAGAAAATAACCAAAATACG CTAAATAAATACACTCAAGATTTAACTCAATTAGCCATTGATGGTAAGCTTGACCCTGTGATTGGTCGTGATAGTGAAAT TCGTCGTGCTATTCAAGTATTACAACGAAGAACTAAAAATAATCCAGTTTTAATTGGTGAACCTGGTGTGGGTAAAACTG CTATTGTTGAAGGTTTAGCACAACGTATTATTAATCATGAAGTATCAGAAGGTATCAAAGGCAAGCGTGTTTTATCGCTA GACATGACAGCACTGATAGCTGGTGCTAAATATCGAGGCGAATTTGAAGAGCGACTAAAAGTCGTACTTAAAGAATTAGA AGACAAACAAGGTCAAATCATCTTATTTATTGATGAATTACACACCATGGTTGGTATTGGCAAATCCGATGGTTCTATGG ATGCTGGAAATATATTAAAACCAGCTTTAGCTCGTGGTGATCTACACTGTATAGGCGCTACTACACTAAATGAATATCGA CAATATATTGAAAAAGATTCTGCTTTAGAACGTCGCTTCCAAAAAGTATTAGTAGACGAACCAACCGAACAAGACACTAT TGCTATTTTACGGGGTCTTAAGGAAAAATACGAAGTTCATCATGGTGTAGAAATCACAGATCCTGCTATTATTGTCGCTG TCACTTATTCAACCAGATATATTACTGACAGACAATTACCAGATAAAGCCATTGATTTGATTGATGAAGCAGCCTCACAA ATCCGCATGGAAATCGACTCAAAACCAGAATCAATGGATAAACTTGACCGTAAATTAGTGCAACTTAAAATTGAACGTAT GGCACTCAAAAAAGAAAAAGACAAAGCTTCTAAAACACGATTAGAAGAATTGGTAAAGTTGATTAAATCACTAGAAAAAG AGTACGCTAATTTGGAAAAAATTTGGAAAAAAGAAAAGCTAGTAGTCCAAAGTGCACACCATCTTAAAGAAGAACTAGAA CAAGCAAAATCCGATTTAGAAAATGCACATCGTAACAATAATTTAGCCAAAATGAGTGAACTTCAATACGGAATTATTCC TGAATTAGAACAGAAAATTAACATGGCTGAAAATGCTGACACAGAACAAATGACATTACTTAGGAATAAAGTCACTGAAA ATGAAATCGCCCATATTGTTGCCCGTTGGACAGGTATTCCTGTGGATAAAATGATGGCAGGTGAAAAAGATAAGCTACTA CAGATGGAAACTATTATTCACAAACGCCTAGTTGGTCAAGATAAGGCTGTTAAAGTTATTTCAGATGCTGTGCGTCGTGC GAGAAGTGGCCTATCTGACCCTAACCGGCCTGATGGTTCGTTTCTATTTATGGGCCCTACTGGTGTGGGAAAAACTGAAC TTACCAAAGCCTTAGCAGACTTCTTATTTGATACAGAACAAGCTATTGTACGTATTGATATGAGCGAATTTATGGAAAAA CACTCAGTTGCACGTTTGATTGGTGCGCCTCCAGGATATGTTGGTTATGAACAAGGAGGGGTATTAACTGAAGCTGTGCG TCGCAAGCCTTATTCGATCATTTTACTTGATGAAATCGAAAAAGCCCATTCAGATTTGTTTAATATTTTATTACAAGTAC TAGATGATGGTAGACTAACGGATAGTCAAGGTCGAACAGTCGATTTTAAAAATACTATTATTATCATGACTTCAAACCTA GGTTCTCACTTAATTCAACAAAACCCAGGAAAAGATATGTCTGTTGAACTAACTAAAATTGTTAGTGAACACTTCAGGCC TGAGTTTGTCAATCGTATTGATGAGATCGTAACCTTTAAAACACTAGAAAAATCTCAAATTAAAGGTATTGCACTCAGGC AAATTGAGATCTTATCATCACGTTTATCCAAGCTTAATCTTAGAATAACATTAAGCGACATAGCCATAAGTATGATTGTT AACAAAGGCTATAACCCTGTGTTTGGCGCCAGACCGCTCAAACGTACCATACAACAATTATTAGAAAATCCATTGTCAAA AAAAATCATTGCTGGAGAATTTTTATCAGACTCAACTATTCATGGAGATGTTAAAGATGGAAAAATCGTTTTCTATTAA Protein sequence : MNFDKLTAQFQQDLSTAQSIAITKNHSTIEAVHIISSMLQNNNSSVNNLLSNIDIDIHQLKQETDKEINTLATISNPSGD VNISQNLLRLLNQMEKLALNKKDSYLSTEIFLLAIIKGNDTTTKLLKAHGVNEINLNQAIDNLRGGKNVNNQNTENNQNT LNKYTQDLTQLAIDGKLDPVIGRDSEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINHEVSEGIKGKRVLSL DMTALIAGAKYRGEFEERLKVVLKELEDKQGQIILFIDELHTMVGIGKSDGSMDAGNILKPALARGDLHCIGATTLNEYR QYIEKDSALERRFQKVLVDEPTEQDTIAILRGLKEKYEVHHGVEITDPAIIVAVTYSTRYITDRQLPDKAIDLIDEAASQ IRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKTRLEELVKLIKSLEKEYANLEKIWKKEKLVVQSAHHLKEELE QAKSDLENAHRNNNLAKMSELQYGIIPELEQKINMAENADTEQMTLLRNKVTENEIAHIVARWTGIPVDKMMAGEKDKLL QMETIIHKRLVGQDKAVKVISDAVRRARSGLSDPNRPDGSFLFMGPTGVGKTELTKALADFLFDTEQAIVRIDMSEFMEK HSVARLIGAPPGYVGYEQGGVLTEAVRRKPYSIILLDEIEKAHSDLFNILLQVLDDGRLTDSQGRTVDFKNTIIIMTSNL GSHLIQQNPGKDMSVELTKIVSEHFRPEFVNRIDEIVTFKTLEKSQIKGIALRQIEILSSRLSKLNLRITLSDIAISMIV NKGYNPVFGARPLKRTIQQLLENPLSKKIIAGEFLSDSTIHGDVKDGKIVFY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 7e-148 | 42 |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-96 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_001219552.1 | ATP-dependent Clp protease ATP-binding subunit ClpB | VFG0079 | Protein | 2e-164 | 45 |
