Gene Information

Name : RCIX125 (RCIX125)
Accession : YP_684949.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Virulence
Product : putative transcription regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 2607851 - 2608057 bp
Length : 207 bp
Strand : -
Note : -

DNA sequence :
ATGATAAACCACCTGAAGGAACTGAGGGCCCGGCACAATATGACGCAGGAAGACCTGGCGCAGAAGGTCGGTGTCTCGAG
GCAGACGATCGTCGCCATCGAGAAGCAGAAGTACGACCCGTCGCTGTCGCTCGCGTTCAGGCTGGCCAGGTGTTTCGGAG
TCAAAATTGAGGACATATTCGAGGAGGATACCGATGTTCAAAACTGA

Protein sequence :
MINHLKELRARHNMTQEDLAQKVGVSRQTIVAIEKQKYDPSLSLAFRLARCFGVKIEDIFEEDTDVQN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 4e-09 48
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-09 48
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-10 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCIX125 YP_684949.1 putative transcription regulator VFG2168 Protein 1e-09 48
RCIX125 YP_684949.1 putative transcription regulator VFG2175 Protein 1e-09 48