Gene Information

Name : RRC301 (RRC301)
Accession : YP_687358.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Virulence
Product : putative ABC-type transport system, permease component
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 242857 - 243903 bp
Length : 1047 bp
Strand : -
Note : -

DNA sequence : 
ATGGAAGTCAGTGTTACCCGGTGGGCGGGTATTTCTTTAGTTCTCTTCATCGTCATGATCCTTATCGCCGTCGTGGCGAC
GGCTGTGGGTCCGGCGAATATCAGCCCTGATAAGGTTGTCATGATCATCCTGTCTAAAGTGCCCGTAGTGCAGGATTACC
TTACGAAGGTCTGGACTGTCGGGGAAGAGGCTATCGTGATCAACGTCCGCCTTCCGAGAGTCATACTCGGACTGCTGGTA
GGCGCTTCGCTGGCTGTTGCCGGCGTGACTACTCAGGGCATCTTCAAGAACCCGATGGCTGACCCATACATTCTTGGCGT
CTCCTCTGGTGCCGCTTTTGGGGCGTCGGCGGTCATCGTCCTCGGGGTTAGCGTGTTTCTGCAGTCGATCAGCATCACGG
CTGGAGCGCTTGCCGGGGCGCTGATTGTCTCTTTCCTCGTCTTCAACATCGCCCGGACACGCAACCGGATACCTGTAGAG
ACTTTGCTGCTCTCGGGTATCGCCGTTTCGGCGTTCTTCTCGGCTATCACCTCTTTCCTGATGTACATCTCCGGCAACAG
CCTGAACCAGATCGTGTTCTGGGTGATGGGGGCGCTCTGGAGCAGCAACTGGGATGACGTCCTGATCCTGGCTCCGTTTT
TCGTGGCCGGGTCGCTGATCGTCTACGCTTATTCCCGCGACCTGAACCTGATGCTGCTTGGGGACGAGAGCGCGGCGCAC
CTGGGATCGGACGTGACCCGGGTCAAGTATATCCTTCTGGGAGTATCTTCGCTAATGGCCGCTGCAGCAGTGTCTGTCAC
GGGCATTATCGGCTTTGTCGGCCTTATTATCCCCCACATCATGAGGCTGATCGTCGGGCCCGATCACAGGGTTCTTATAC
CTGCCTCGGCACTTGTAGGTGCGATTTTCCTTGTTCTCGCGGACACGTTTGCGAGGATGGTCATCCAGCCCACGGAAATG
CCCGTAGGCATCGTGACAGCCCTGATCGGAGCCCCGTTCTTCGTATACCTCCTGATCAGGCAGAAGAAGACACTGAGGGG
GGTGTGA

Protein sequence : 
MEVSVTRWAGISLVLFIVMILIAVVATAVGPANISPDKVVMIILSKVPVVQDYLTKVWTVGEEAIVINVRLPRVILGLLV
GASLAVAGVTTQGIFKNPMADPYILGVSSGAAFGASAVIVLGVSVFLQSISITAGALAGALIVSFLVFNIARTRNRIPVE
TLLLSGIAVSAFFSAITSFLMYISGNSLNQIVFWVMGALWSSNWDDVLILAPFFVAGSLIVYAYSRDLNLMLLGDESAAH
LGSDVTRVKYILLGVSSLMAAAAVSVTGIIGFVGLIIPHIMRLIVGPDHRVLIPASALVGAIFLVLADTFARMVIQPTEM
PVGIVTALIGAPFFVYLLIRQKKTLRGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CpI19_1928 YP_005686352.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 8e-26 43
Cp1002_1913 YP_005682168.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-26 43
CpC231_1907 YP_005684260.1 Iron(III) dicitrate transport system permease fecD Virulence PiCp 7 Protein 6e-26 43
cpfrc_01919 YP_003784319.1 hypothetical protein Not tested PiCp 7 Protein 6e-26 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RRC301 YP_687358.1 putative ABC-type transport system, permease component VFG0922 Protein 2e-38 47