Gene Information

Name : glnA-1 (RCIX649)
Accession : YP_685376.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Virulence
Product : glutamine synthetase I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 2161842 - 2163284 bp
Length : 1443 bp
Strand : -
Note : -

DNA sequence :
TTGCCTTCGGATAAGATCAAAGCGATTTTCGACCTGATCGAGAAAGAAAAAATCAAATACGTCGACTACAAGTTTATCGA
CGTTCCCGGCATCTGGCAGCACAAGACGCACCCGATCGCCGAGCTGGACGAAAGTATATTCACAGAGGGGAGCGGCTTCG
ATGGATCGAGCATCAGGGGCTTCAAGGGCATCGAAGAGAGCGACATGATCCTCGTGCCCGACCCGGAGACCGCCTTCATC
GACCCGTTCATCAAGGAGAAGACAATCTCCATCACCTGCGACGTCAAGGAGCCCGGCACGCTGAAGAACTTCGAGAACGA
CCCGAGGTACATCGCCAGGAAAGCAGAGCAGTATCTGATTGACTCAGGCATCGCAGACACCAGCTTCTGGGGCCCTGAGC
TCGAGTTCTTCGTGTTCGACGACGTCCAGTACGACGTCATGTCCCCGTACAGAGGCACCAGCTACTCGATCAACTCCAAC
GAAGGCATCTGGAACTCAAACGCCAACCATGTCCCCAACCTCGGCCACAGGGTCAGGTTCAAGGAAGGCTACTTCCCGGT
CTCTCCCACGGACACCCAGACAGACATGAGGAACGAGATGGTCGGCGTCATGCACGAAGTCGGCATTCAGGTAGAACTCC
ACCACCACGAGGTCGCGACCGCCGGCCAGGCGGAAATCGACATGAGGTTCGACAGGCTCAAATGCATGGCAGACAAGGTC
ATGAAATACAAGTACGTCGTCAAGAACGTCGCTGCCAGGAACGGCAAGACTGCGACCTTCATGCCTAAACCCCTGTTTGG
CGATAACGGCAGTGGCATGCACGTCCACCAGAGCCTGTGGAAGGACGGCAAGCCCCTCTTCTACGACAAGGACGGCTACG
CTATGCTCAGCCAGACCGCTCTGTACTACATCGGCGGCCTGCTGACCCACGCGCCAGCCCTGCTGGCCATCTGCAGCCCG
AGCACCAACTCCTACAAGAGGCTCGTGCCCGGCTACGAAGCCCCGGTCAACCTGGTCTTCTCGAAGAGCAACAGGAGCGC
TGCAATCAGGATCCCCATGTATAACAACAACCCCAAGTCCAAGCGTATCGAGTTCAGGCCGCCCGACGCGACCAGCAACC
CGTACCTCGCCTTCTCGGCCATGCTCATGGCAGGCCTCGACGGCATCAAGAACAAGATCGACCCCACAGAGGCAGGCTTC
GGGCCGCTCAACAAGAACATCTACCACCTGTCGGACGAGGAGAAGGCGAAGATCAAGTCGGTGCCGGGATCCCTGGAAGA
GTCGCTTAACGCACTGGAGGCGGACCACAAGTTCCTCACCCAGGGCAACGTCTTTACCGAGGCCTTCATCGAGTCCTGGA
TAGAGTACAAGCGCTTAAACGAGGTTAACCACGTCCGCATGAGGCCCCACCCATACGAATTATATCTGTACTATGACGCC
TGA

Protein sequence :
MPSDKIKAIFDLIEKEKIKYVDYKFIDVPGIWQHKTHPIAELDESIFTEGSGFDGSSIRGFKGIEESDMILVPDPETAFI
DPFIKEKTISITCDVKEPGTLKNFENDPRYIARKAEQYLIDSGIADTSFWGPELEFFVFDDVQYDVMSPYRGTSYSINSN
EGIWNSNANHVPNLGHRVRFKEGYFPVSPTDTQTDMRNEMVGVMHEVGIQVELHHHEVATAGQAEIDMRFDRLKCMADKV
MKYKYVVKNVAARNGKTATFMPKPLFGDNGSGMHVHQSLWKDGKPLFYDKDGYAMLSQTALYYIGGLLTHAPALLAICSP
STNSYKRLVPGYEAPVNLVFSKSNRSAAIRIPMYNNNPKSKRIEFRPPDATSNPYLAFSAMLMAGLDGIKNKIDPTEAGF
GPLNKNIYHLSDEEKAKIKSVPGSLEESLNALEADHKFLTQGNVFTEAFIESWIEYKRLNEVNHVRMRPHPYELYLYYDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-88 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA-1 YP_685376.1 glutamine synthetase I VFG1399 Protein 4e-121 56