Gene Information

Name : RCIX1294 (RCIX1294)
Accession : YP_685912.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Resistance
Product : ABC-type transport system, ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1641181 - 1641876 bp
Length : 696 bp
Strand : -
Note : -

DNA sequence :
ATGAATTCAGTCGCCGACGCCGTCGTCGATATCGCCGGCGTCCGCAAGTCCTACATGATGGGCAAGAACGAGCTTGAGGT
GCTCAAGGGCGTCAACGCGACCATAAGACGCGGCGAGTTCGTCAGCATCATGGGCCCTTCAGGCTCCGGCAAGTCGACCC
TCATGAACCTGATCGGACTTCTCGACCGGCCCACGTCGGGCGAGATCTCCATCAACGGACACCCGATCAGCAAGCTCAAC
GACGTGGAGCTGTCGTCACTTCGCGGCAGGGAGATCGGCTTCATCTTCCAGTCGTTCAACCTGGTTTCCCGGCTGAGCGC
GCTGAAAAACGTGGAGCTGCCCATGATCTTCCAGGAGACCGCCAAGCATAAGCGCACCGAGATCGCGAAGAAGTACCTCG
AAGAGGTCGGCCTCTCCGATCGCATGACCCACCGGCCCAACGAACTGTCGGGCGGCCAGAGGCAGAGAGTCGCCATCGCC
CGGGCGCTGGTCAATGACCCCGCGATCCTGCTGGCAGACGAGCCCACCGGCAACCTCGACACAAAGACGGGCGAGGAGAT
CATGCAGCTGTTCCTGGACCTGAACAAAAATGGCAGGACCATCGTCATGGTCACCCACGAGCCCGATCTCGCCGAGTACG
GCGACCGGATCATCCGTATCCGTGACGGGGTCATCGTAGGCGATGACAGAAAGTAA

Protein sequence :
MNSVADAVVDIAGVRKSYMMGKNELEVLKGVNATIRRGEFVSIMGPSGSGKSTLMNLIGLLDRPTSGEISINGHPISKLN
DVELSSLRGREIGFIFQSFNLVSRLSALKNVELPMIFQETAKHKRTEIAKKYLEEVGLSDRMTHRPNELSGGQRQRVAIA
RALVNDPAILLADEPTGNLDTKTGEEIMQLFLDLNKNGRTIVMVTHEPDLAEYGDRIIRIRDGVIVGDDRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-31 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCIX1294 YP_685912.1 ABC-type transport system, ATPase component NC_012469.1.7686878. Protein 3e-60 58
RCIX1294 YP_685912.1 ABC-type transport system, ATPase component NC_008702.1.4606598. Protein 1e-42 48
RCIX1294 YP_685912.1 ABC-type transport system, ATPase component CP001581.1.gene598.p Protein 6e-39 45
RCIX1294 YP_685912.1 ABC-type transport system, ATPase component CP001581.1.gene798.p Protein 3e-39 44
RCIX1294 YP_685912.1 ABC-type transport system, ATPase component NC_012469.1.7685735. Protein 6e-33 42