Gene Information

Name : RCIX1527 (RCIX1527)
Accession : YP_686112.1
Strain : Methanocella arvoryzae MRE50
Genome accession: NC_009464
Putative virulence/resistance : Virulence
Product : putative transcription regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1476
EC number : -
Position : 1445224 - 1445430 bp
Length : 207 bp
Strand : +
Note : -

DNA sequence :
ATGAGGACGCGCATCAAGGAGTACCGGGCTAAGTATGACATGACCCAGGAGGACCTGGCCCAGAAGGTCGGCGTCCGCCG
GGAGACCATCGTCTTCCTGGAGAAAGGCAAGTACAACCCATCCCTCAAGCTGGCGCACGACGTGGCGAAAGTGCTGAACG
CGAAGATCGACGAGCTGTTCATCTTTGATGACGAAACGGACGCGTAA

Protein sequence :
MRTRIKEYRAKYDMTQEDLAQKVGVRRETIVFLEKGKYNPSLKLAHDVAKVLNAKIDELFIFDDETDA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH2314 YP_254229.1 hypothetical protein Not tested ¥ðSh1 Protein 3e-08 44
EF0524 NP_814301.1 Cro/CI family transcriptional regulator Not tested Not named Protein 3e-04 41
ef0042 AAM75247.1 EF0042 Virulence Not named Protein 2e-04 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
RCIX1527 YP_686112.1 putative transcription regulator VFG2175 Protein 8e-05 41
RCIX1527 YP_686112.1 putative transcription regulator VFG2168 Protein 8e-05 41