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Name : copB (RRC473) Accession : YP_687493.1 Strain : Methanocella arvoryzae MRE50 Genome accession: NC_009464 Putative virulence/resistance : Resistance Product : putative Cu(2+)-translocating P-type ATPase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2217 EC number : 3.6.3.4 Position : 105341 - 107383 bp Length : 2043 bp Strand : + Note : - DNA sequence : ATGGACCACGAGCATCATAAACCGCCAGATCACGGGGGACCCGAAGCTGAAGAGGATACCCGGCTGAAGCACAAAGGCTA TGAGGCCCACAAAGGTCATGCCGATCACCACAAGATGATGCTCGAGGACTTCAAGAAGCGGTTCATCGTCTCAACTATCC TCACAATCCCGATCGTCGTCTTATCGCCCACAATCCAGGGCATCCTGGGCTACCGCTTCGATTTCCCCGGGTCAATATAT CTTCAATTCATTTTATCTTCGATCGTGTACTTCTATGGCGGCTACCCGTTCCTCAAGGGCATCTTCGAGGAACTCGGGAA ACGCACGCCGGGCATGATGACGCTCATCGCTGTGGCAATCACGGTAGCTTATGTGTACAGTTGCGCTGTCGTGTTCGGGC TGCCGGGCATGACCTTCTTCTGGGAACTCGCAACGTTGATCGACATCATGCTGCTGGGCCACTGGATAGAGATGAGGTCA GTCATGGGGGCATCCAGGGCACTCGAGGAACTGGTCAAGATCATGCCTTCGGAAGCCCACATGGTGATGGATGGCATGGT CCATGACGTCAGCGTGGAAGACCTGCAGGTGGGTGACCGGGTACTGGTCAAGCCCGGCGAAAAAATACCCGTGGACGGAG AAGTGATCGAAGGCGATACCAGCGTTAACGAAGCCATGCTTACCGGCGAGTCAAAGCCCGTGTCTAAAACTGTGGGCGAT AAGGTCATCGGTGGATCTGTCAACGGCGAAGGCTCCATCAAGGCAGAGGTAAAAAAGACTGGCAAGGATACATACCTTAA CCAGGTCGTCGAGCTGGTTAAGCAGGCCCAGGAAAGCAAATCCCGGGCGCAGGACCTGGCAAACCGGGCCGCATTTATCC TGACGATCATCGCGCTGAGCGTCGGCGCCATTACCTTTATTATCTGGGTTCTCGCAGGGCAGACATTAAACTTCGCGGTA GAACGAACTGCCACTGTGATGGTGATCACCTGCCCTCATGCTCTGGGGCTGGCGGTGCCACTGGTTATTGCTGTGTCAAC CGCACTGGCAGCGAAATCGGGCCTGCTCATCCGCAACCGGACTGCCTTCGAGAAGGCCCGGGGCTTACAGGCGATCATCT TCGACAAGACCGGTACGCTGACCCTGGGTAAATTTGGAGTAACCGAGGTCTTACCGCTGGAGGGCAGCTATCGTGAGGAG GATTTGCTAACATACACGGCATCTCTGGAATCCAGATCCGAGCATCCGATCGCGGCTGGTATTACCGGAAGCGCCCGGGA TAAGGGCATCGGCCTGAAAACCGTCTCCGGCTTCAAATCTATTCCCGGCAAAGGTGTGGAAGGCATCATCGACGGCAAAA TATACCGGGTGGTCAGCCCGGGCTATCTCGAGGAAAAGGGCCTTGCGATCGATAATGATCGGGTGGAAAAAGTAAAGCAG CAGGGAAAAACAGTCGTCTTCCTGCTTGAGGGCGACACGCTGGCCGGGGCCATTGCGCTGGCCGACATTATCCGCCCCGA ATCTAAAGATGCCATCGCCAGGCTAAAAGAGATGGGCATCAAGTGCATGATGCTGACCGGCGATAACCGCTACGTAGCCC GGTGGGTAGCGGAAGATCTGGGCCTGGACGACTATTTCGCCGAGGTGCTGCCCGACCAGAAGGTAGAGAAAGTAAAGGAA GTCCAGCGAAAATACGTCACCGGCATGGTGGGCGACGGGGTAAACGACGCGCCTGCGCTGACTCGGGCAAACGTCGGCAT CGCCATCGGCGCGGGGACCGACGTGGCCATAGAGAGCGCCGACGTCATACTGGTGAAAAACGACCCGCGAGACGTGGTGA AAATTGTCAGCCTCTCCAAAAAGACTTACCGCAAGATGGTGGAGAACCTTCTCTGGGCCACCGGGTACAACGCTTTTGCT ATCCCGCTAGCAGCGGGCGTTTTATACGCTTACGGAATCTTTCTCTCCCCCGCGGCAGGCGCCATTCTCATGAGCCTGAG CACGGTGATCGTTGCCATCAATGCCCGGATGCTGAAAGCGTGA Protein sequence : MDHEHHKPPDHGGPEAEEDTRLKHKGYEAHKGHADHHKMMLEDFKKRFIVSTILTIPIVVLSPTIQGILGYRFDFPGSIY LQFILSSIVYFYGGYPFLKGIFEELGKRTPGMMTLIAVAITVAYVYSCAVVFGLPGMTFFWELATLIDIMLLGHWIEMRS VMGASRALEELVKIMPSEAHMVMDGMVHDVSVEDLQVGDRVLVKPGEKIPVDGEVIEGDTSVNEAMLTGESKPVSKTVGD KVIGGSVNGEGSIKAEVKKTGKDTYLNQVVELVKQAQESKSRAQDLANRAAFILTIIALSVGAITFIIWVLAGQTLNFAV ERTATVMVITCPHALGLAVPLVIAVSTALAAKSGLLIRNRTAFEKARGLQAIIFDKTGTLTLGKFGVTEVLPLEGSYREE DLLTYTASLESRSEHPIAAGITGSARDKGIGLKTVSGFKSIPGKGVEGIIDGKIYRVVSPGYLEEKGLAIDNDRVEKVKQ QGKTVVFLLEGDTLAGAIALADIIRPESKDAIARLKEMGIKCMMLTGDNRYVARWVAEDLGLDDYFAEVLPDQKVEKVKE VQRKYVTGMVGDGVNDAPALTRANVGIAIGAGTDVAIESADVILVKNDPRDVVKIVSLSKKTYRKMVENLLWATGYNAFA IPLAAGVLYAYGIFLSPAAGAILMSLSTVIVAINARMLKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SH0105 | YP_252020.1 | hypothetical protein | Not tested | SCCmec | Protein | 3e-102 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| copB | YP_687493.1 | putative Cu(2+)-translocating P-type ATPase | BAC0629 | Protein | 0.0 | 72 |
| copB | YP_687493.1 | putative Cu(2+)-translocating P-type ATPase | BAC0079 | Protein | 2e-143 | 46 |
| copB | YP_687493.1 | putative Cu(2+)-translocating P-type ATPase | BAC0383 | Protein | 3e-113 | 43 |
