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Name : treC (VC0395_A0433) Accession : YP_001216388.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 462046 - 463734 bp Length : 1689 bp Strand : + Note : identified by match to protein family HMM PF00128; match to protein family HMM TIGR02403 DNA sequence : ATGAGTAGCTCAACCCAATCCATGCCTTGGTGGAAAACCGCTGCAATTTATCAAATTTATCCGAAAAGTTTTTGCGATAG TGGCGCGAAGGGCGTGGGCGATCTGCAAGGCATTATCAGCAAGCTCGATTATTTGCAAAAGCTTGGGATTGAAGCGATTT GGCTGACGCCGATTTATCAATCGCCTATGGTCGATAATGGGTATGACATTGCCGATTATTACGCGATTAATCCAGACTTT GGCACGATGCAAGATTTCGAACAACTGCTGAAAGAAGCCCATCGTCGTGGTATGCGCATCATCATGGATATCGTGGTTAA CCACACCTCAACCGAACACGCTTGGTTCCAATCTGCATTGGGCGATCGCAATAGCCCTTACCGTGATTACTATATTTGGC GTAAGCCGGTTAACGGTGGTGTGCCGAACAACTGGCAATCCAAATTTGGCGGGAGTGCGTGGGCGCTGGATGAAGCGACC GGTGAGTATTATTTGCATCTGTTTGCCAAAGAGCAGGCCGATTTGAACTGGGAAAATCCGCAAGTTCGAGAAGAAGTAAA AAACATCATCGGATTTTGGGCTGAAAAAGGTGTCGATGGCTTCCGACTTGACGTGATTAACCTCATTTCCAAGCAACAAG ATTTTACCAATGATGACATCGGTGATGGTCGTCGTTTTTACACCGATGGCCCAAGAGTGCATGAGTATCTGCAAGAGATC AGCCGTGATGTTTTCCAGCGTTATGGCAGCGTAACCGTCGGCGAAATGTCTTCAACCACCTTAGAACATTGCCAACAATA TTCTGCGCTCGATGGTCGAGAGCTTTCTATGGTGTTTAATTTCCATCATTTGAAAGTCGATTATCCGAATGGCGAAAAGT GGACGAAAGCGCCGTTTGATTTTCTGCAACTCAAGCAAATTTTCAATCATTGGCAAACGGGGCTGAATGGCAAAGGATGG GGCGCGCTGTTTTGGTGTAACCATGATCAGCCGCGAATTGTGAGCCGTTTAGGTGATGATCAGCAGTACCGAGTTGAGTC AGCCAAAATGCTGGCGGCCACCATTCACCTAATGCAAGGCACACCTTATATCTACCAAGGTGAAGAGATTGGAATGACCA ACCCTGGCTTTACGTCGATCAAGCAGTATCGCGATGTGGAAAGCATCAACATTCACCAAATCATGGTGCAGCAACAAGGT GTCTCTGAAAGTGACATGCTGGCGATTTTGGCGCAAAAATCTCGTGATAATTCACGCACGCCAATGCAGTGGGATGCCAG TCTCAACGCTGGATTTACTCGTGGAGAACCTTGGATTGAAGTGGCGCATAACTATCCTGAAATCAATGCACAGGCCGCGT TAGAAGACCCGCATTCGGTGTTCTATTTCTACCGTCGTTTGCTATCGCTACGTAAGAAAGTGGCGGTGATTACGGACGGT GATTACACCGACTTGTTGCCTGAGCATAAAGAGATTTTTGCTTATCAGCGTCGTAATCAGAAACAAGTGTTGATCTGTTT GAATAACTATTACGGTCACGAAGCCGAATGCGTTCTGCCAGAATTACCGCTCGATGATGCGCTCTACTTGCTAGGCAACT ATCCGGGTATTGAATTACAGCGCGTGTTGGCGCACCAAGTGTTACGTCCATACGAAACACGCATCATCCTGATTGAGTCA CCCCTATAG Protein sequence : MSSSTQSMPWWKTAAIYQIYPKSFCDSGAKGVGDLQGIISKLDYLQKLGIEAIWLTPIYQSPMVDNGYDIADYYAINPDF GTMQDFEQLLKEAHRRGMRIIMDIVVNHTSTEHAWFQSALGDRNSPYRDYYIWRKPVNGGVPNNWQSKFGGSAWALDEAT GEYYLHLFAKEQADLNWENPQVREEVKNIIGFWAEKGVDGFRLDVINLISKQQDFTNDDIGDGRRFYTDGPRVHEYLQEI SRDVFQRYGSVTVGEMSSTTLEHCQQYSALDGRELSMVFNFHHLKVDYPNGEKWTKAPFDFLQLKQIFNHWQTGLNGKGW GALFWCNHDQPRIVSRLGDDQQYRVESAKMLAATIHLMQGTPYIYQGEEIGMTNPGFTSIKQYRDVESINIHQIMVQQQG VSESDMLAILAQKSRDNSRTPMQWDASLNAGFTRGEPWIEVAHNYPEINAQAALEDPHSVFYFYRRLLSLRKKVAVITDG DYTDLLPEHKEIFAYQRRNQKQVLICLNNYYGHEAECVLPELPLDDALYLLGNYPGIELQRVLAHQVLRPYETRIILIES PL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 4e-134 | 48 |
