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Name : tcpT (VC0395_A0360) Accession : YP_001216316.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein T Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 386895 - 388406 bp Length : 1512 bp Strand : + Note : identified by match to protein family HMM PF00437 DNA sequence : ATGTCAATTGATATAAAGTATTTAAGTCGTATTGATATAGATCGTGAGGAGTTTTTCTTTAAAGACTCGAGATTAATGTG TAAGAAATTCGATGAAGAGCGTGAGGTATTAACTCTTCTCGAATTCGATACAAAATTTCGGGTCAATCTTCTGAAGAAAG ATAAAGTTTATAAGTATTTCTTAGTTTCAGATGCAAATCATAAATTATTAATAGCGAATCTTGTTACCGAGCAGCAAGCT AAAGACTTAAGTTTTATAGAAAAAGATATAATGAAAATTGCATCATCTGCTACAGCTTATGGTGCAAGTGACATCCACTT CATCCGAGAGGATAGGATTTGTAAAATAAAATTCCGTGTGAATGGCACAATGATCGACTATAGAGAAATATTAAGTTCAG AAGCCGATTCGCTAATGTTTGTTCTATACAATGTGATGGCAACAACGAAAGAAACGACGTGGAACCGAAAACTACCTCAA GATGCAAATATTATTCTTGTGATCAACGAAAAGGCATATCGCTTTCGTTACGCACATATGCCTTTATTTGGTGAGGGAGG GAAAAACTATCATGCGGTAGTTCGTATTATCTATCCTTCAAATAATTTTGTTTGTACAAACTATCAAGATATTGGGTATA ACGAGGCTGATACCGATGCGATTGCAAGAATTCTAAATACATCTTATGGATTGTTCATTGTTTCCGGAACAACAGGTTCT GGTAAATCAACATCTTTGAAAAAGTATATAGAATTACTTTTCTTTAATAAATATAAGGGAAAAGGATGTTTTGTCACCGT TGAAGATCCTGTCGAGTATTTAATTTCTGGAGCACAGCAAAGCTCAATTGTTGCCGATAATGATGATAAAACAAAGAACC CATTTGCTGATGCGGTACGTTCAGCGATGCGTCGAGATCCGGACGTTATTATGATCGGTGAAATTCGTGATAAACCTACC GTTGAGGCTCTATCAAGTGCTGTAGAAAGTGGCCACTATTGTCTTACGACCATCCATGCAGGTTCTGTTGTTTCTGTTTT ACAAAGACTTTCAGGATTAGGGATGAAGGCTGACAAAATAGCATCACCTGGATTTCTGGCTGGTATTACAAGTCAGAAAT TAATTCCCGAACTTTGCCCAAGTTGTAAAGTTTCCTTTGTTGATGAACGTTATCAGCGTGCTGTATTTAGCGCGAATGAA AATGGCTGTGAGGCATGTAATCATTCTGGGTTTAAAGGAAGGCTGCTTTTATTAGAAACATTAGTCCCAACAGTTGAAGA TTTAGAGCTAGTGGCGAGTGAAAACTGGGTTTCCCTTTATCGTAAATATCGGGAGCGACGCTTTATAAAAACTGGAAAAA AAGGTCTTGGTGAAGGCTTCAGCATTAAAGATAAAGCTTATTACAATGTTTTAAAAGGTAAAGTGTGTCACGAATATTTT ATGCTGCATTTCGGTCAGTTAGATCATGAGGATGAAAATATAATATATGAAAATTATCTCCAAGAAGTATAG Protein sequence : MSIDIKYLSRIDIDREEFFFKDSRLMCKKFDEEREVLTLLEFDTKFRVNLLKKDKVYKYFLVSDANHKLLIANLVTEQQA KDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADSLMFVLYNVMATTKETTWNRKLPQ DANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGS GKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPT VEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSANE NGCEACNHSGFKGRLLLLETLVPTVEDLELVASENWVSLYRKYRERRFIKTGKKGLGEGFSIKDKAYYNVLKGKVCHEYF MLHFGQLDHEDENIIYENYLQEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpT | AAK20762.1 | toxin-coregulated pilus biosynthesis protein T | Virulence | VPI | Protein | 0.0 | 100 |
| tcpT | CAA45462.1 | - | Virulence | VPI | Protein | 0.0 | 100 |
| tcpT | YP_001216316.1 | toxin co-regulated pilus biosynthesis protein T | Virulence | VPI-1 | Protein | 0.0 | 100 |
| tcpT | AAK20792.1 | toxin-coregulated pilus biosynthesis protein T | Virulence | VPI | Protein | 0.0 | 99 |
| VC0835 | NP_230483.1 | toxin co-regulated pilus biosynthesis protein T | Virulence | VPI-1 | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tcpT | YP_001216316.1 | toxin co-regulated pilus biosynthesis protein T | VFG0098 | Protein | 0.0 | 99 |
