Gene Information

Name : tcpS (VC0395_A0359)
Accession : YP_001216315.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Virulence
Product : toxin co-regulated pilus biosynthesis protein S
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 386447 - 386905 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence : 
ATGAATATCAAACTATCATTTATTTCAATTGCTTTTCTATCGTTAAGTTTTAATGTTGCTGCTAACGAATTTGAAAAATC
TCAAGAGCACTACAAAAGTGTAACTGATTTAAAAAACAAAATCGAAATACTAGAGTTAGAAAAGAAAATAACAGAGCTGA
GTGGCGAGATTCGCAATGCAAGAATGCCAAAAATAGATAAGTCTGCACCCGTTTTATCTCCTCAGCCTGTAGTAAAATCG
TCAGAAGAATTACAAAAAAGTATCGAACATATAGAAGAAGAGCTCAAAGTGGAATTGGCTTATTTGGTTAACAATGGTCA
ACAAAAAAAATATACATTCAATCTTAATGGCAAACTTATCACATTGGTTAATGGTGATTTTGTAAATGGTTGGAAATTCA
TTGAAGACCAAAATAAAATTCAATTTTTCAAGGGCAATAAGGTAATCGATGTCAATTGA

Protein sequence : 
MNIKLSFISIAFLSLSFNVAANEFEKSQEHYKSVTDLKNKIEILELEKKITELSGEIRNARMPKIDKSAPVLSPQPVVKS
SEELQKSIEHIEEELKVELAYLVNNGQQKKYTFNLNGKLITLVNGDFVNGWKFIEDQNKIQFFKGNKVIDVN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpS CAA45461.1 - Virulence VPI Protein 2e-47 100
tcpS YP_001216315.1 toxin co-regulated pilus biosynthesis protein S Virulence VPI-1 Protein 3e-47 100
tcpS AAK20761.1 toxin-coregulated pilus biosynthesis protein S Virulence VPI Protein 2e-47 100
VC0834 NP_230482.1 toxin co-regulated pilus biosynthesis protein S Virulence VPI-1 Protein 4e-46 99
tcpS AAK20791.1 toxin-coregulated pilus biosynthesis protein S Virulence VPI Protein 2e-46 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcpS YP_001216315.1 toxin co-regulated pilus biosynthesis protein S VFG0097 Protein 1e-46 99