Gene Information

Name : tcpH (VC0395_A0352)
Accession : YP_001216308.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Virulence
Product : toxin co-regulated pilus biosynthesis protein H
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 380231 - 380641 bp
Length : 411 bp
Strand : +
Note : -

DNA sequence : 
ATGCACAAAAAATTAAAAGCTTGGGGGGGGGCTGCAGGTCTATTCGTTGTAGCACTAGGAGTAACGCTCATCGCACTCCC
GATGCGACAAAAAAACTCGCACGGCACAATGATTATTGATGGTACAGTCACACAAATTTTTTCTACTTATCAAGGTAATC
TATCCAATGTTTGGCTTACCCAGACAGATCCACAAGGTAACGTAGTCAAAAGTTGGACTACACGTTATCAAACATTGCCA
GATCCTAGCTCTCAGAAGCTAAATTTGATTCCCGACTACTCAGAAAGTAATGTGAGCCGTGATTACAATGTGTTGAGTAT
TTATCAACTCGGCAAAGGTTGTTTTCTCGCCTTCCCTTACAAGCAGCTTACGGCTGAAAAAATGTGGTTTTCCTGTCAAA
GCGATTTTTAG

Protein sequence : 
MHKKLKAWGGAAGLFVVALGVTLIALPMRQKNSHGTMIIDGTVTQIFSTYQGNLSNVWLTQTDPQGNVVKSWTTRYQTLP
DPSSQKLNLIPDYSESNVSRDYNVLSIYQLGKGCFLAFPYKQLTAEKMWFSCQSDF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tcpH YP_001216308.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI-1 Protein 3e-51 100
tcpH AAK20754.1 toxin-coregulated pilus biosynthesis protein H Virulence VPI Protein 2e-51 100
tcpH ACK75630.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 2e-51 100
tcpH CAA45454.1 - Virulence VPI Protein 3e-47 100
tcpH ACK75610.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 5e-51 99
tcpH ACK75615.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 9e-51 98
tcpH ACK75635.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 3e-51 98
tcpH ACK75620.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 3e-51 98
tcpH ACK75640.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 2e-50 97
VC0827 NP_230475.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI-1 Protein 3e-50 97
tcpH AAK20784.1 toxin-coregulated pilus biosynthesis protein H Virulence VPI Protein 2e-50 97
tcpH ACK75600.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 8e-50 96
tcpH ACK75605.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 2e-50 95
tcpH ACK75625.1 toxin co-regulated pilus biosynthesis protein H Virulence VPI Protein 4e-50 95

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tcpH YP_001216308.1 toxin co-regulated pilus biosynthesis protein H VFG0090 Protein 9e-51 97