|
Name : tcpP (VC0395_A0351) Accession : YP_001216307.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein P Function : - COG functional category : K : Transcription COG ID : COG3710 EC number : - Position : 379581 - 380246 bp Length : 666 bp Strand : + Note : identified by match to protein family HMM PF00486 DNA sequence : ATGGGGTATGTCCGCGTGATTTATCAATTTCCCGATAACCTTTGGTGGAACGAATGCAGTAATCAAGTCTATTATGCACA AGATCCAATGAAGCCGGAAAGGCTGATTGGTACACCGAGCATAATGCAGGCTAAGTTATTGAAAATACTCTGTGAATATC ATCCTTCCCCCTGTCCAAATGATCAAATAATTAAAGCACTTTGGCCTCATGGATTTATCAGCTCTGAAAGTCTAACTCAG GCAATCAAAAGAACCAGAGATTTTTTGAATGATGAACATAAGACGTTGATCGAAAATGTAAAGTTACAAGGTTATCGTAT TAATATTATACAAGTTATTGTTTCTGAAAACATTGTTGATGAAGCTGACTGTAGTCAAAAAAAATCAGTAAAAGAGCGGA TAAAAATTGAGTGGGGGAAGATAAACGTAGTTCCTTATCTTGTTTTTTCGGCGCTTTATGTTGCTTTGCTACCTGTGATT TGGTGGAGTTATGGCCAATGGTATCAACATGAATTAGCCGGCATCACTCATGATCTACGAGATTTAGCAAGGTTACCGGG GATAACAATCCAAAAACTGTCAGAACAAAAACTCATGTTCGCTATTGATCAACATCAGTGTTCCGTGAATTATGAACAGA AGACATTAGAATGCACAAAAAATTAA Protein sequence : MGYVRVIYQFPDNLWWNECSNQVYYAQDPMKPERLIGTPSIMQAKLLKILCEYHPSPCPNDQIIKALWPHGFISSESLTQ AIKRTRDFLNDEHKTLIENVKLQGYRINIIQVIVSENIVDEADCSQKKSVKERIKIEWGKINVVPYLVFSALYVALLPVI WWSYGQWYQHELAGITHDLRDLARLPGITIQKLSEQKLMFAIDQHQCSVNYEQKTLECTKN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpP | ACK75629.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 2e-101 | 100 |
| tcpP | CAA45453.1 | - | Virulence | VPI | Protein | 2e-101 | 100 |
| tcpP | YP_001216307.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI-1 | Protein | 3e-101 | 100 |
| tcpP | AAK20753.1 | toxin-coregulated pilus biosynthesis protein P | Virulence | VPI | Protein | 2e-101 | 100 |
| tcpP | AAK07626.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 5e-101 | 99 |
| tcpP | ACK75609.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 5e-101 | 99 |
| VC0826 | NP_230474.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI-1 | Protein | 5e-100 | 98 |
| tcpP | AAK20783.1 | toxin-coregulated pilus biosynthesis protein P | Virulence | VPI | Protein | 3e-100 | 98 |
| tcpP | ACK75599.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 3e-100 | 98 |
| tcpP | ACK75639.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 3e-100 | 98 |
| tcpP | ACK75634.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 7e-99 | 97 |
| tcpP | ACK75614.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 3e-99 | 97 |
| tcpP | AAK07624.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 2e-99 | 96 |
| tcpP | ACK75604.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 2e-99 | 96 |
| tcpP | ACK75619.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 9e-99 | 96 |
| tcpP | AAK07623.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 4e-98 | 95 |
| tcpP | AAK07625.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 4e-98 | 95 |
| tcpP | ACK75624.1 | toxin co-regulated pilus biosynthesis protein P | Virulence | VPI | Protein | 1e-90 | 94 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tcpP | YP_001216307.1 | toxin co-regulated pilus biosynthesis protein P | VFG0089 | Protein | 2e-100 | 98 |
