|
Name : tcpI (VC0395_A0350) Accession : YP_001216306.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : toxin co-regulated pilus biosynthesis protein I Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 377282 - 379144 bp Length : 1863 bp Strand : - Note : identified by match to protein family HMM PF00015; match to protein family HMM PF00672 DNA sequence : ATGATAAAAAAAATAATTTCGGTTTTTTTATTACTTGCGTGCATCATTACGTCGGCTTTTACTGCCTTTTTCTATCACTC GAAACTATCAGATCAAACAAAATCTATATCTAGCCTTAGTTCTCAGCAGGCACAAGAACGGTTGCAAAGTTATCAGGATT CTTTAGATTTTTATAAAAAACTTAATATCTCTCTCTCAGTTGCAATAGCCAATTCACTTCGCGATAAAGCAGTCGAAGAA CTCAACGCTATTGCTTTACGTATACAGGAAAATCATGGATTTATTGGTGTTACCTTCGCTAGTTTAGATGGCACCATGTT TACAGATATTGGTACTCTAGATTGGAATGCAAAGACATTGAGAAGAGATTGGTTTGTTAAAACGGTCGAACTCGGTACTA AACATTACACAGCTTTTGATATCGATAAAACAACTGGGCAACACGTTCTCACTATTGCCACCCCTGTTTATGTAGGCAAC GACATTGTCGGCAGTGTCGCTTTAGATATTGCAGGTGATCAGATTGCCTCACCTAACGGCAGTGGGATGTTTATGATGAC GGATAGGAATTTTAATGTATTTGCATCTGATCTCACTCACAGTACCTTAATTGGAAAAGATTTAACGAAAGAGAAGCCTC TGTTCAAAAATCTGGTCTCAGGCCAGTATGTCACCTTCAGTGATGCTGATAGTCATTGGTTTGCAGTGTCACAAACAGAA ATAGATGGTGAAAATAAACTGTTCACTATTATTGATATTCAACAAATCGTCCAAACATACAAGCGAGATATCCAGTTGAT TATTGCTGGATTTAGTGGTTTTTCATGCGTGATGCTAATTGGACTATATTGGGTTCTAAGCAAAGAACTCTCAGGTGTTA GACAGATCAGAGAATGGATTCTTTCCCTTTCTGATGGTCAGATAAAAGAACGCAGGCCTATAAAATTCCATAACGAGCTC GACACTATTGCCCAAAGTCTTGAAAATTTACAATTTAGGCTTCTTGATGTGGTGAGAAATTCTCATCGGACTATGAATGA TTTAAGTATCAAACAGACTGACATTACGTATTCAATTGAAGGGAATACGAATAATTCACAGCAAGAACTTGGGCTCATTG AACAAGTGGCCACAGCAACAACGCAACTATCATGTACTTCTTTTGATGTAATGCAACAAGCTCAAAGTGCAGAGCTTAAT GCGGAGACGGCCCAAAAATTGATTGCTGAAAGTCATGATATTATCGATTCATCAAGCAAACAAACCGAAATGGTAACCCT ATCGATCCATGAATCCCAACAAATAATCAATCAGTTACGCGAGTTTTCCGATAATATTAGTTCGGTTACGGATGTCATTA ATAATATATCAGATCAAACTAACTTACTTGCCCTAAATGCAGCTATCGAGGCTGCTCGTGCAGGTGAACAGGGGCGCGGA TTTGCTGTAGTAGCGGATGAAGTTCGTTCTCTTGCAGTGAAAACTCAGCAATCGACTATAGATATTCAAGGTATTATTTT GAAACTGCAAGAGCAATCGCAGTTGGCAGATCAAGTGATGACACGTAATGTTTCACTTATTCATGAAACACAAGTTGCCA ATCGGGCACTTATCGCATCCTTTAACCTGATTTCTGATAAGGTTCTTGAAATATCAAACATAAACTCCATCGTTTCGACT GCCGCAAATGAACAAAAAATAGTAACTGAAGATGTAGCAAAACAGATGGAAGATATTCGATATCTAGTTCAAGAGAATTT ATCCGCGATGGAACGAACTAAACAGGCAAATCAGAATATCTCTGATTTGACCACCAATCTAAATGATGCTCTTAGCTTTT TTAAAATTGAGCTTACTTCATAA Protein sequence : MIKKIISVFLLLACIITSAFTAFFYHSKLSDQTKSISSLSSQQAQERLQSYQDSLDFYKKLNISLSVAIANSLRDKAVEE LNAIALRIQENHGFIGVTFASLDGTMFTDIGTLDWNAKTLRRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGN DIVGSVALDIAGDQIASPNGSGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHWFAVSQTE IDGENKLFTIIDIQQIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWILSLSDGQIKERRPIKFHNEL DTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELN AETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRG FAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVST AANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKIELTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tcpI | YP_001216306.1 | toxin co-regulated pilus biosynthesis protein I | Virulence | VPI-1 | Protein | 0.0 | 100 |
| tcpI | AAK20752.1 | toxin-coregulated pilus biosynthesis protein I | Virulence | VPI | Protein | 0.0 | 100 |
| VC0825 | NP_230473.1 | toxin co-regulated pilus biosynthesis protein I | Virulence | VPI-1 | Protein | 0.0 | 99 |
| tcpI | AAK20782.1 | toxin-coregulated pilus biosynthesis protein I | Virulence | VPI | Protein | 0.0 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tcpI | YP_001216306.1 | toxin co-regulated pilus biosynthesis protein I | VFG0088 | Protein | 0.0 | 99 |
