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Name : cadA (VC0395_A2658) Accession : YP_001218536.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : lysine decarboxylase, inducible Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1982 EC number : 4.1.1.18 Position : 2812171 - 2814372 bp Length : 2202 bp Strand : + Note : identified by match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711 DNA sequence : ATGGCGCTCGTCTTACTCACTGTGCAGTGCACAGAGAGCGCCTTTTTTCGCCTTGGAGATGTCCAAATGAATATTTTCGC TATCTTGAACCACATGGGTGTGTTCTTTAAAGAAGAGCCTGTTCGCCAACTGCATGCAGCATTAGAAAAAGCCGGTTACG ACGTGGTTTATCCGGTGGATGACAAAGATCTGATCAAGATGATTGAGATGAACCCACGCATTTGCGGCGTGCTGTTCGAC TGGGATAAATACTCGCTAGAGCTGTGTGAGCGCATCAGTAAAGTCAATGAAAAACTGCCAGTGCACGCCTTTGCTAACGA GCAATCGACATTAGATATTTCGCTAACCGACCTGCGCCTCAACGTGCATTTCTTCGAATACGCTCTGGGCATGGCCGACG ATATCGCCATCAAGATCAACCAAGCGACCCAAGAGTACAAAGACGCGATCATGCCTCCGTTTACTAAGGCGCTGTTCAAA TACGTGGAAGAGGGTAAATACACCTTCTGTACTCCGGGCCATATGGGCGGTACTGCGTTCCAGAAAAGCCCTGTTGGCAG CATTTTCTACGATTTCTACGGTCCAAATACTTTCAAAGCGGACGTATCGATTTCGATGCCAGAACTGGGTTCACTGCTCG ATCACTCCGGCCCACACAAAGAAGCGGAAGAGTACATCGCACGCACGTTCAATGCCGATGCCTCTTACATCGTGACCAAC GGTACATCGACCTCGAACAAGATCGTCGGTATGTTCTCCGCGCCTGCGGGTAGCACAGTGCTGGTGGATCGTAACTGCCA TAAATCATTGACTCACTTAATGATGATGACGGACGTCACCCCCATTTACTTCCGTCCAACCCGTAACGCTTACGGCATTC TCGGTGGTATTCCACAGAGCGAATTCAGCCGTGAAGTGATTGCAGAGAAAGTGGCAAACACTCCGGGGGCGAGCGCGCCA AGCTACGCGGTGATCACCAACTCGACTTACGATGGCCTGCTGTACAACACCCAGTTCATCAAAGAGTCGTTGGATTGCAA ACACATCCACTTCGACAGTGCATGGGTGCCTTACACTAACTTCAACCGTATTTATGAAGGCAAGTGCGGCATGAGTGGTG AAGCGATGCCGGGTAAAGTGTTCTACGAAACGCAGTCCACGCACAAACTGCTGGCGGCGTTCTCGCAAGCCTCGATGATT CATGTCAAAGGTGAGTTTGACCGCGAGTCGTTCAACGAAGCCTTTATGATGCACACCTCAACCTCACCACAGTACGGCAT TGTGGCATCGACGGAAACTGCCGCTGCAATGATGCGTGGCAACACTGGTCGTAAGTTGATGCAAGATTCGATTGATCGTG CGATTCGCTTCCGTAAAGAGATCAAACGTCTGAAAGGCGAGAGCGAAGGCTGGTTCTTCGATGTGTGGCAACCCGAGAAT ATTGAGACCACCGAGTGCTGGAAACTCGATCCAAACCAAGATTGGCACGGCTTCAAGAATCTTGATGACAACCACATGTA CCTTGATCCAATTAAAATCACTCTGCTCACTCCGGGAATGAGCAAAGATGGCGAATTGGAGCAGAGCGGTATTCCGGCAT CACTGGTCTCTAAATACCTTGATGAACACGGCATCGTGGTTGAGAAAACCGGCCCTTACAACCTACTGTTCCTGTTCTCT ATCGGTATTGATAAGTCAAAAGCAATGCAGTTGCTGCGTGGCCTGACTGAGTTCAAACGCGGTTACGATCTGAACCTGAC CATTCGTACCATGCTGCCTTCACTGTACCGTGAAGACCCAGCTTTCTACGAAGGCATGCGTATTCAAGAGTTGGCGCAAG GCATTCACGATTTAACCCGTAAATACCAACTGCCAGAGCTGATGTACAAAGCGTTCGATGTGCTGCCAGAGATGAAAGTG ACGCCACACGTGGCATGGCAACAAGAGCTGCGCGGTCAAACCGAAGAGATCCTGCTTAACGAGATGGTGGGTCGCGTGAG CGCCAATATGATCCTGCCTTATCCTCCAGGCGTGCCATTGGTACTGCCAGGTGAAATGGTGACAGACAGCTCTCGCCCTG TGTTGGATTTCTTGGAAATGCTGTGTGAAATCGGCGCGCATTACCCAGGATTTGAGACAGACATTCATGGTTTGTATCGC CAAAAAGATGGCTCTTACACCGTAAAAGTGCTGAAGGACTAA Protein sequence : MALVLLTVQCTESAFFRLGDVQMNIFAILNHMGVFFKEEPVRQLHAALEKAGYDVVYPVDDKDLIKMIEMNPRICGVLFD WDKYSLELCERISKVNEKLPVHAFANEQSTLDISLTDLRLNVHFFEYALGMADDIAIKINQATQEYKDAIMPPFTKALFK YVEEGKYTFCTPGHMGGTAFQKSPVGSIFYDFYGPNTFKADVSISMPELGSLLDHSGPHKEAEEYIARTFNADASYIVTN GTSTSNKIVGMFSAPAGSTVLVDRNCHKSLTHLMMMTDVTPIYFRPTRNAYGILGGIPQSEFSREVIAEKVANTPGASAP SYAVITNSTYDGLLYNTQFIKESLDCKHIHFDSAWVPYTNFNRIYEGKCGMSGEAMPGKVFYETQSTHKLLAAFSQASMI HVKGEFDRESFNEAFMMHTSTSPQYGIVASTETAAAMMRGNTGRKLMQDSIDRAIRFRKEIKRLKGESEGWFFDVWQPEN IETTECWKLDPNQDWHGFKNLDDNHMYLDPIKITLLTPGMSKDGELEQSGIPASLVSKYLDEHGIVVEKTGPYNLLFLFS IGIDKSKAMQLLRGLTEFKRGYDLNLTIRTMLPSLYREDPAFYEGMRIQELAQGIHDLTRKYQLPELMYKAFDVLPEMKV TPHVAWQQELRGQTEEILLNEMVGRVSANMILPYPPGVPLVLPGEMVTDSSRPVLDFLEMLCEIGAHYPGFETDIHGLYR QKDGSYTVKVLKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 0.0 | 76 |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 0.0 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA | YP_001218536.1 | lysine decarboxylase, inducible | VFG1670 | Protein | 0.0 | 64 |
