Gene Information

Name : VC0395_A2362 (VC0395_A2362)
Accession : YP_001218262.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : DNA-invertase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1961
EC number : -
Position : 2516604 - 2517170 bp
Length : 567 bp
Strand : -
Note : identified by match to protein family HMM PF00239; match to protein family HMM PF02796

DNA sequence :
ATGAAAATTGGCTATGCCCGTGTCTCAACAAATGATCAAGAGCTTCACCTACAACTCGACGCTCTAAATGAAATGGGGTG
TGACAAGATATACACTGAAAAAGCGTCTGGAAAAACTTTTAACCGCCCTGAGCTTGAAAAAGCACTCGACAACCTACGTG
AAGGAGATGTCTTCGTTGTATGGCGCTTAGATCGACTGGGACGAAGCCTGCCTCACCTTATCGAAACAGTTAACGGGTTA
AAAGAGCGAAACATTGGGTTTGTATCAATTGCGGAAGCAATTGATACTTCAAGCCCTGCGGGAGAACTGATCTTTCACAT
TTTCGGTGCTATCGCGCAATTTGAACGTTCTCTGATTAGCGAAAGAACCAAGGCAGGCTTAGCCGCAGCCAAAAGGCGCG
GGAAAAATGTAGGTAGAAAGCCAAGTATGTCTAGGAAAGACATGAGATTAGCTGCTGGTATGCTACTTAGCGGTTCAATC
ACCAAAACTGAAGTAGCAAAACATTTTGGTGTATCAAGACCGACCTTAGATAAGGCACTGAAAAACATATCTTTGGAGGA
AGAGTAA

Protein sequence :
MKIGYARVSTNDQELHLQLDALNEMGCDKIYTEKASGKTFNRPELEKALDNLREGDVFVVWRLDRLGRSLPHLIETVNGL
KERNIGFVSIAEAIDTSSPAGELIFHIFGAIAQFERSLISERTKAGLAAAKRRGKNVGRKPSMSRKDMRLAAGMLLSGSI
TKTEVAKHFGVSRPTLDKALKNISLEEE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpR ACD85600.1 TnpR resolvase Not tested SGI2 Protein 2e-44 56
res AGF34985.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGF35025.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGF35059.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGK06929.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGK06966.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGK07012.1 resolvase Not tested SGI1 Protein 2e-44 56
res AGK07070.1 resolvase Not tested SGI1 Protein 2e-44 56
res AAK02044.1 resolvase Not tested SGI1 Protein 2e-44 56
CDBH8_0918 YP_005160010.1 transposase-like protein Not tested Not named Protein 7e-30 52
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-33 47
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 4e-33 47
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 4e-33 47
ABTW07_3871 YP_005797119.1 resolvase IS26 Not tested AbaR4e Protein 2e-30 46
tnpR ACN81015.1 TnpR resolvase Not tested AbaR5 Protein 2e-30 46
1_318 CAJ77076.1 Resolvase Not tested AbaR1 Protein 1e-30 46