Name : epsF (VC0395_A2304) Accession : YP_001218219.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 2456314 - 2457534 bp Length : 1221 bp Strand : - Note : identified by match to protein family HMM PF00482; match to protein family HMM TIGR02120 DNA sequence : ATGGCCGCGTTTGAATACAAAGCGCTGGATGCCAAGGGACGCCATAAAAAAGGCGTGATTGAGGGCGATAATGCACGTCA GGTGCGTCAGCGCCTGAAAGAGCAAAGCCTAGTGCCGATGGAGGTGGTGGAGACTCAAGTCAAAGCCGCGCGCAGTCGCA GCCAAGGTTTTGCGTTTAAGCGTGGGATCAGTACGCCGGATCTGGCGCTGATCACTCGCCAATTGGCGACTTTAGTTCAA TCCGGTATGCCACTGGAAGAGTGTTTACGCGCGGTTGCCGAGCAGTCGGAAAAACCGCGGATTCGCACCATGTTGGTGGC GGTGCGCGCTAAAGTGACCGAAGGTTACACCCTCTCTGATAGTCTTGGCGATTATCCGCACGTGTTTGATGAGCTGTTTC GTTCTATGGTTGCGGCGGGCGAAAAATCTGGCCACCTCGATTCCGTTCTCGAACGTTTAGCTGACTACGCCGAAAACCGC CAGAAAATGCGCTCTAAACTGCAACAGGCCATGATTTACCCTGTGGTGCTGGTGGTGTTTGCGGTCGGTATCGTGGCGTT TTTGTTGGCAGCGGTAGTGCCGAAAATCGTGGGTCAGTTTGTGCAAATGGGGCAAGCCTTGCCGGCATCGACTCAGTTTC TGCTTGATGCCAGCGATTTCCTGCAACATTGGGGGATTTCGCTGCTGGTCGGTCTCTTGATGCTGATTTATCTGGTGCGC TGGTTGCTGACCAAGCCCGATATTCGTTTGCGTTGGGATCGCCGAGTGATTTCCTTGCCTGTGATTGGCAAGATTGCACG CGGTCTGAATACTGCGCGCTTTGCGCGTACGCTGTCGATCTGTACCTCAAGTGCAATCCCGATTCTGGATGGTATGCGCG TTGCGGTGGATGTGATGACCAATCAGTTTGTGAAACAGCAAGTGTTGGCTGCGGCCGAAAACGTACGCGAAGGCTCTAGC CTGCGCAAAGCGCTAGAGCAGACCAAGCTCTTTCCTCCCATGATGCTGCACATGATTGCCAGTGGTGAGCAGAGTGGAGA ATTGGAAGGCATGTTGACGCGCGCTGCGGATAACCAAGACAACAGTTTTGAATCAACGGTCAACATCGCGCTTGGCATTT TTACCCCGGCCTTGATTGCCTTGATGGCGGGGATGGTGCTGTTTATTGTGATGGCGACCCTGATGCCGATTTTGGAAATG AATAACTTAATGAGTCGTTAA Protein sequence : MAAFEYKALDAKGRHKKGVIEGDNARQVRQRLKEQSLVPMEVVETQVKAARSRSQGFAFKRGISTPDLALITRQLATLVQ SGMPLEECLRAVAEQSEKPRIRTMLVAVRAKVTEGYTLSDSLGDYPHVFDELFRSMVAAGEKSGHLDSVLERLADYAENR QKMRSKLQQAMIYPVVLVVFAVGIVAFLLAAVVPKIVGQFVQMGQALPASTQFLLDASDFLQHWGISLLVGLLMLIYLVR WLLTKPDIRLRWDRRVISLPVIGKIARGLNTARFARTLSICTSSAIPILDGMRVAVDVMTNQFVKQQVLAAAENVREGSS LRKALEQTKLFPPMMLHMIASGEQSGELEGMLTRAADNQDNSFESTVNIALGIFTPALIALMAGMVLFIVMATLMPILEM NNLMSR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-96 | 55 |
gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-95 | 55 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
epsF | YP_001218219.1 | general secretion pathway protein F | VFG2049 | Protein | 1e-93 | 56 |
epsF | YP_001218219.1 | general secretion pathway protein F | VFG0181 | Protein | 3e-89 | 49 |
epsF | YP_001218219.1 | general secretion pathway protein F | VFG1870 | Protein | 1e-76 | 42 |