Gene Information

Name : VC0395_A2288 (VC0395_A2288)
Accession : YP_001218204.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 2443907 - 2446228 bp
Length : 2322 bp
Strand : +
Note : identified by match to protein family HMM PF00575

DNA sequence :
ATGAGCAAAGCTATCTGCCACCAGATTGCTCAAGAACTGAATGTTCGCCCTGAGCAAGTTATCGCTGCCGTCACCCTGAT
CGACGATGGCAATACCGTTCCTTTTATCGCCCGTTACCGTAAAGAGGTGACGGGAGGATTGGATGATACCCAACTGCGCA
ACTTAGATAGCCGTCTTGCCTATCTGCGTGAGATGGATGACCGTCGCCAAACCATCCTCAAATCGATTCAAGAACAAGGC
AAACTCACCCCTGAGCTGGAGCAGGCGATTTTAAGTGCCGACAGCAAAAACCGCCTTGAAGATCTCTATCTGCCTTACAA
ACCGAAACGCCGCACCAAAGGCCAAATCGCGATTGAAGCGGGTCTTGAGCCACTGGCCGATACGCTGTGGACGCAGCCTA
ATACTGACCCTGAAAGCGAAGCGGCAAAATACATTAATGCCGAGAAAGGCGTCGCCGACAGCAAAGCCGCACTGGATGGC
GCACGCGCTATCGTGATGGAACGCATCGCGGAAGATGCCAACCTACTGGAAAAAATCCGTCAGCACCTCAATCGCAACGC
GGAAATTGTGTCGCGCGTGATCGAGGGTAAAGAGCAAGCGGGCGAGAAATTTAAAGATTACTTTGATCACCGCGAGCCGA
TCAGCAAAGCGCCTTCACATCGCGCGTTGGCGATGCTGCGTGGCCGTAACGAAGGCTTCTTAACCCTAACGCTGAATGCC
GATCCTGAATTGGAAGAGAGTGCGCGCCAATCCTACTGCGAAACTCTGATTGCCGAGCATTACGGCATTCATTTGAGCCA
AGCGACGGCCGATGCGTGGCGCAAGCAGGTGATCAGTTGGGCATGGAAAATCAAAATCTCCATGCACATGGAAACCGAAC
TGATGAGCGCGATGAAAGAGCGCGCGGAAATCGAAGCGATTGAAGTGTTCGCCACCAACTTAAAAGATCTGCTGATGGCG
GCACCGGCGGGGCCTCGCGCGACACTGGGCCTCGATCCGGGTCTGCGCACTGGCTGTAAAGTCGCCGTGGTTGACGCAAC
CGGTAAAGTGCTGGCAACCGACACGATTTACCCGCACGCACCACAGCATCAATACGATCGCGCCATGCAGTCTATTGCTC
TGCTGGTGAAAAAGTTCAACGTGGATCTGATTGCGATTGGTAACGGTACGGCGTCGCGTGAAACCGATGCTTTTGCGGCA
GATTTAATCAAGCGCGGCAATCTCAAAGTACAAAAAATCATGGTCAGCGAAGCGGGCGCATCGGTGTATTCCGCTTCAGA
GCTAGCGGCGAAAGAGTTCCCAAATCTCGATGTGTCACTGCGTGGCGCAGTCTCTATCGCGCGTCGTCTGCAAGACCCAC
TCGCAGAATTAGTGAAGATCGACCCGAAATCGATAGGGGTTGGCCAGTATCAACACGATGTGAGCCAAACCCTGCTTGCG
AAACGTCTTGATGCGATTGTTGAGGACTGTGTAAACGCCGTAGGTGTGGATGTGAATACCGCCTCGGCAGCGCTACTGAC
TCGTGTTGCGGGCTTGTCTGCAGCACTCGCGCAAAACATTGTGGATTATCGTGATGAAAACGGTCGTTTTGAGTCGCGTA
GTGCCCTCAAAAAAGTGCCGCGTTTGGGGCCTAAAGCGTTTGAACAGTGTGCCGGCTTCCTACGCATTATGGATGGCAAA
AACCCGCTCGACGCTTCAGCGGTGCACCCAGAAGCGTATCCGGTGGTGAAAACTATCGCTGAGAAGAACAGCAAAGATCT
GAAAGCGCTGATTGGCAATACAGAGTTCCTGCGCACTCTTCGCGCGGTCGATTACACCGATGAAAACTTTGGTGTACCCA
CCGTGACCGACATCATCAAGGAGCTGGATAAACCGGGGCGTGACCCGCGTCCGGAATTCAAAACCGCGACCTTTGCTGAA
GGCATCCATGAGGTGTCAGATCTGGAAGTGGGCATGGTGTTGGAAGGCGTGGTCTCTAACGTCGCCAACTTTGGCGCGTT
CGTGGATATCGGCGTCCATCAAGATGGCTTAGTGCATATTTCTGCGCTGACCGATCGCTTTATCTCAGATCCGCGTGAAG
TGGTTAAAGCCGGTGACATCGTCAAAGTCAAAGTGATGGAAGTGGATGTGCAGCGTAAGCGTATCGCCCTTTCGATGCGC
TTAAACGATGAGCCGGGACAAGATAACCGCAGCCAACGCAGCGCTGCGCCACGCTCAGGGCAAGAGCGTCGCGCTCCACG
CCGTGATGAGCCGCAAGGCAATGCACTGGGTGGTGCCATGGGCGGTGCGTTTGCCGCTGCTTTCGCTAAAGCGAAGAAAT
AG

Protein sequence :
MSKAICHQIAQELNVRPEQVIAAVTLIDDGNTVPFIARYRKEVTGGLDDTQLRNLDSRLAYLREMDDRRQTILKSIQEQG
KLTPELEQAILSADSKNRLEDLYLPYKPKRRTKGQIAIEAGLEPLADTLWTQPNTDPESEAAKYINAEKGVADSKAALDG
ARAIVMERIAEDANLLEKIRQHLNRNAEIVSRVIEGKEQAGEKFKDYFDHREPISKAPSHRALAMLRGRNEGFLTLTLNA
DPELEESARQSYCETLIAEHYGIHLSQATADAWRKQVISWAWKIKISMHMETELMSAMKERAEIEAIEVFATNLKDLLMA
APAGPRATLGLDPGLRTGCKVAVVDATGKVLATDTIYPHAPQHQYDRAMQSIALLVKKFNVDLIAIGNGTASRETDAFAA
DLIKRGNLKVQKIMVSEAGASVYSASELAAKEFPNLDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQTLLA
KRLDAIVEDCVNAVGVDVNTASAALLTRVAGLSAALAQNIVDYRDENGRFESRSALKKVPRLGPKAFEQCAGFLRIMDGK
NPLDASAVHPEAYPVVKTIAEKNSKDLKALIGNTEFLRTLRAVDYTDENFGVPTVTDIIKELDKPGRDPRPEFKTATFAE
GIHEVSDLEVGMVLEGVVSNVANFGAFVDIGVHQDGLVHISALTDRFISDPREVVKAGDIVKVKVMEVDVQRKRIALSMR
LNDEPGQDNRSQRSAAPRSGQERRAPRRDEPQGNALGGAMGGAFAAAFAKAKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 62