Gene Information

Name : VC0395_A1931 (VC0395_A1931)
Accession : YP_001217855.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : NupC family protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 2061684 - 2062940 bp
Length : 1257 bp
Strand : -
Note : identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804

DNA sequence :
ATGAGCCTGTTTATGAGCCTCATCGGCATGGCAGTTCTGCTAGGAATCGCAGTTCTACTGTCAAGTAACCGTAAAGCTAT
CAATCTAAGAACTGTGGGTGGCGCTTTTGCTATCCAATTTTCACTGGGTGCATTTATTCTGTATGTGCCTTGGGGCCAAG
AGCTACTTCGTGGCTTTTCGGATGCCGTATCGAATGTTATTAACTACGGTAACGATGGTACTTCATTCCTCTTCGGTGGA
CTGGTATCAGGCAAAATGTTTGAAGTGTTTGGCGGCGGCGGTTTCATTTTCGCATTCCGCGTACTACCAACACTGATCTT
CTTCTCAGCACTGATTTCTGTACTGTACTACTTGGGTGTTATGCAATGGGTTATCCGCATTCTTGGCGGTGGTCTGCAAA
AAGCACTGGGTACATCACGCGCGGAATCTATGTCTGCGGCTGCAAACATTTTCGTGGGTCAAACTGAAGCACCATTAGTT
GTTCGTCCATTCGTTCCAAAAATGACTCAATCTGAGCTGTTTGCGGTAATGTGTGGTGGCTTGGCTTCTATCGCAGGTGG
TGTACTTGCGGGTTACGCTTCAATGGGCGTTAAGATCGAATACTTGGTAGCGGCGTCATTCATGGCGGCACCGGGTGGTC
TGCTGTTCGCAAAACTGATGATGCCTGAAACTGAAAAACCACAAGACAATGAAGACATTACTCTTGATGGTGGTGACGAC
AAACCGGCTAACGTTATCGATGCGGCTGCTGGCGGTGCTTCTGCTGGTCTGCAACTTGCTCTGAACGTTGGTGCAATGTT
GATTGCCTTTATCGGTTTGATTGCTCTGATCAACGGTATGTTGGGTGGCATCGGTGGTTGGTTCGGTATGCCTGAACTGA
AACTGGAAATGCTACTGGGCTGGTTGTTTGCGCCTCTGGCTTTCCTGATCGGTGTTCCTTGGAACGAAGCAACTGTTGCG
GGTGAGTTCATCGGTCTAAAAACCGTTGCTAACGAATTCGTTGCTTACTCTCAGTTTGCGCCTTACCTGACTGAAGCGGC
ACCAGTGGTTCTGTCTGAGAAAACCAAAGCGATCATCTCTTTCGCTCTGTGTGGTTTTGCGAACCTTTCTTCTATCGCAA
TTCTGCTTGGTGGTTTGGGTAGCTTGGCACCTAAGCGTCGTGGCGACATCGCTCGTATGGGGGTCAAAGCGGTTATCGCA
GGTACTCTATCTAACCTGATGGCAGCGACCATCGCTGGCTTCTTCCTCTCTTTCTAA

Protein sequence :
MSLFMSLIGMAVLLGIAVLLSSNRKAINLRTVGGAFAIQFSLGAFILYVPWGQELLRGFSDAVSNVINYGNDGTSFLFGG
LVSGKMFEVFGGGGFIFAFRVLPTLIFFSALISVLYYLGVMQWVIRILGGGLQKALGTSRAESMSAAANIFVGQTEAPLV
VRPFVPKMTQSELFAVMCGGLASIAGGVLAGYASMGVKIEYLVAASFMAAPGGLLFAKLMMPETEKPQDNEDITLDGGDD
KPANVIDAAAGGASAGLQLALNVGAMLIAFIGLIALINGMLGGIGGWFGMPELKLEMLLGWLFAPLAFLIGVPWNEATVA
GEFIGLKTVANEFVAYSQFAPYLTEAAPVVLSEKTKAIISFALCGFANLSSIAILLGGLGSLAPKRRGDIARMGVKAVIA
GTLSNLMAATIAGFFLSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 6e-60 47