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Name : ribD (VC0395_A1861) Accession : YP_001217785.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : 3.5.4.26 Position : 1978664 - 1979767 bp Length : 1104 bp Strand : - Note : identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00227; match to protein family HMM TIGR00326 DNA sequence : ATGCCTATGTTTACCTCTTTTGATCATCAAATGATGTCTCGCGCGATTGAACTTGCGTGGCGCGGGCATTTTACCACTTC TCCTAATCCTAATGTCGGCTGCGTGATCACTCGCGGTGAGCAGATTGTAGGGGAAGGTTTCCATTTTCGCGCGGGGGAAC CCCATGCTGAAGTGCATGCTATGCGCCAAGCCGGTGAGCTTACCCGCGGTGCGACCGCTTATGTCACTTTAGAACCTTGC TCTCATTATGGTCGCACACCGCCTTGTGCTGAAGGGCTTATTAAAGCCGGGGTTGCGAAAGTGATTTGCGCAATGCAAGA CCCTAACCCACAAGTGGCGGGGAAGGGCGTACAAATGCTGCGTGATGCCGGGATTGAGGTTGAAGTGGGGTTGCTGGAAG CGGATGCTCGAGTACTCAACCGCGGTTTTCTAAAACGTATGGAAACCGGCATGCCTTTTGTGCAGCTTAAAATGGCGGCG AGTCTCGATGGACAAACCGCGCTCGCTAACGGTAAAAGCCAGTGGATTACCTCTCCTGCAGCACGTAAAGATGTTCAGCG GTTTCGCGCGCAAGCCAGTGCGATTCTCTCCACCAGTCAAACGGTGCTGGCGGATAATGCTTCTCTGGCGGTGCGTTGGT ACGATTTACCGTCATCGGTACAGGCGCAATACGCAGAAGCGGATTTGCGTCAGCCACTGCGGGTGATTTTGGATCGTCAA CATCAATTGCATCCAGAGTTAGCGTTATACCAAACACCTTCACCCGTGCTGCGAGTTGCCAGCGAGAATGCCGAACTCTG TATCTCTGCTGAGAACGGAAAGCTTGATTTGCGTGAGCTTTTGGCACTACTCGCTCAGCAACACAATGTGAATCAACTCT GGGTAGAGGCGGGGAGCCAACTGGCTCAATCTTTGATTGAGCAAAAGTTGGTGGATGAAATCATTCTCTATTTAGCGCCG AAACTGATGGGCAGTGATGGCCGTGGTTTATTTGGCGCGCTCGGTTTGACGGAAATGGCTGAGGCCATTGAACTCAAAAT AGAAGATTGTCGAATGGTGGGGGCAGATTTGCGGATCATCGCCACCCCAAAAACAAAAGATTAG Protein sequence : MPMFTSFDHQMMSRAIELAWRGHFTTSPNPNVGCVITRGEQIVGEGFHFRAGEPHAEVHAMRQAGELTRGATAYVTLEPC SHYGRTPPCAEGLIKAGVAKVICAMQDPNPQVAGKGVQMLRDAGIEVEVGLLEADARVLNRGFLKRMETGMPFVQLKMAA SLDGQTALANGKSQWITSPAARKDVQRFRAQASAILSTSQTVLADNASLAVRWYDLPSSVQAQYAEADLRQPLRVILDRQ HQLHPELALYQTPSPVLRVASENAELCISAENGKLDLRELLALLAQQHNVNQLWVEAGSQLAQSLIEQKLVDEIILYLAP KLMGSDGRGLFGALGLTEMAEAIELKIEDCRMVGADLRIIATPKTKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 2e-64 | 49 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 2e-64 | 49 |
