Name : VC0395_A1741 (VC0395_A1741) Accession : YP_001217680.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Unknown Product : methyl-accepting chemotaxis protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 1861832 - 1863703 bp Length : 1872 bp Strand : - Note : identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM PF05581 DNA sequence : ATGAGGTTTAGTCAGAAGATCGTTGCCGCTTCATCGGCATTACTACTCTGTGTTATTGCACTGCTGTCATTCCAACAGCT CTCCACCGTTCGTGAGGAGATTGAGTCACTCGTTCAAGATAGCTTGATGGAGATGGTGAAAGGGGTCAAAAACACAATTG AGTCAGATCTTGCCAGTAAAAAGGGATTAGCGCAGTCGACCACTGAGATTTTACAGCTTGATCCAACCAACAAAGCATTT GCTAAGAGTGTTTTAGAATCCCCCAACCTAAAAGGGAGCTTTTTAGCGATTGGTCTTGGCTATGAATCTGATGCGACCGT GGTCGAAAATGATGATGGTTGGGAGCCAAACGCAGATTACGACCCACGTAAGCGTCCTTGGTATGTGGATGCTAAGCGTG AAAGAAAGCTAGTGGTCACCGAGCCTTATGTCGATATCTCGACCAAGAAAATCATCATCTCTATCGGTACGCCAGTTTAT CAGCAGAGTAACTTTGTTGGTGCCATGTTCTATGACGTAGAGCTGACTCAGTTGGCGCAATTGGTTAACTCTGTGAATCT GTTTGATGCGGGTTACTTATTCATCACGACGAAAGACGGCGTTACCATTGCTCACCCGAATGCGGAAAACAATGGCGAAA AATTCAGTCAGTTTTTACCGAATGTCGATCTGAAAGAAGGAACCCAACGGATTGAGCTGGACGGTAAATACTATCTGGTT AAATTTGCCCAAGTGCCATCTGAGAGTTGGTATATCGGCGCTGTGGTGGATGAATCGATCGCGTTTGCGATGGTGGATGA TTTACGCCACAGCTCATTGATTTATACCGTTATTGGCGTATTGCTCAGTATCATTGGCTTAAGCTTCCTAATCAAAGTGC TGATGAAGCCTCTGGGTGCGCTGAGTCGAGCCATTGAAGATGTAGCTTCAGGTCAAGGGGATTTAACTAAACGTTTGGAC ACCAACACCGATATGGAATTTGCAATATTGGCGAAGGATTTCAACGTGTTCTGCGAAACGTTGCAAAAACGTATCCAACA CCTAAAAGGGATTGGCGCGGAAATCATGCATGGTACCGAGCAAACGGTACTGGGTGCGCATGAGTCGGCCAGTGCCATGG CGCAGCAGTTGCAAGAGCTGGAGCAGCTCGCGACGGCAATGCATGAGATGGCGGTAACGGCGACAGAAGTAGCGAATAAC GCGCAAGGAGCAGCGGCTGCGGCTCACGAGGCTGATGAAGCTTCACAAGATGGCAGTAAAGTGGTGAGTGATACCACGCG ATCGATTGATGCGCTTTCTGCTCGTATCGAACAAGCGGTAGAAGAGGTCAAAGGACTAGAAGTGGCGACCGGAAATATCG AAACCATTTTGAAAGTTATTAACGATATTGCTGATCAAACCAACTTGCTGGCACTTAATGCGGCGATTGAAGCCGCGCGC GCGGGGGAATCGGGTCGAGGTTTTGCGGTGGTTGCCGATGAAGTTCGGACGTTGGCACAGCGTACGCAACAATCGACCAC GGAAATTCGCAATATGATCGAACAGTTGCAAAGCGGTGCGAGTGCGGTTTCTGCTGCGATGAATGAGAGTAAGTACACGG CGGATGATGCTGTGCAGAAGGCGCAGCTTGCTAATGAATCTCTGCAACGGATTCGTGGTGCTATCCAACGGATCAGCGAT ATGAACATGCAGATTGCTTCTGCAGCGGAAGAGCAAAGTCTCGTTGCCGAGGAGATCAACACCAATACGGTGAAGATTAA AGACCTCTCGACTCAGGTGGCGGACTCCGCTAAATCAGCGAGTATGGCCATGGAAGTACAAACCGAAAACGTGCGCGAGC AAGGCAAACTCCTCAACACCTTTATCGTGTAG Protein sequence : MRFSQKIVAASSALLLCVIALLSFQQLSTVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTNKAF AKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRKRPWYVDAKRERKLVVTEPYVDISTKKIIISIGTPVY QQSNFVGAMFYDVELTQLAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEGTQRIELDGKYYLV KFAQVPSESWYIGAVVDESIAFAMVDDLRHSSLIYTVIGVLLSIIGLSFLIKVLMKPLGALSRAIEDVASGQGDLTKRLD TNTDMEFAILAKDFNVFCETLQKRIQHLKGIGAEIMHGTEQTVLGAHESASAMAQQLQELEQLATAMHEMAVTATEVANN AQGAAAAAHEADEASQDGSKVVSDTTRSIDALSARIEQAVEEVKGLEVATGNIETILKVINDIADQTNLLALNAAIEAAR AGESGRGFAVVADEVRTLAQRTQQSTTEIRNMIEQLQSGASAVSAAMNESKYTADDAVQKAQLANESLQRIRGAIQRISD MNMQIASAAEEQSLVAEEINTNTVKIKDLSTQVADSAKSASMAMEVQTENVREQGKLLNTFIV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0514 | NP_230165.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 3e-106 | 48 |