Gene Information

Name : VC0395_A1541 (VC0395_A1541)
Accession : YP_001217482.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : NupC family protein
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG1972
EC number : -
Position : 1660077 - 1661294 bp
Length : 1218 bp
Strand : -
Note : identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804

DNA sequence :
TTGGGCGGCGTTATGTCATCACTCCTCGGTATGGGCGCAATTTTGCTGGTTGCGTGGCTATTTTCTACCAATAGAAAAAA
TATCAACTTGCGTACAGTTTCTTTAGCGTTACTGCTGCAAATCTTCTTCGCCTTACTGGTGCTGTATGTACCTGCGGGTA
AAGAGGCACTCAATCGTGTGACGGGCGCGGTGTCACAACTGATCAACTATGGGCAAGATGGTATCGGTTTTGTGTTTGGT
GGCCTCGCCAATGGCAGCGTAGGTTTTGTGTTTGCGATTAATGTCCTTGGCATCATCATTTTCTTCTCTGCACTGATTTC
TGGCCTTTACCATTTAGGCATCATGCCGAAAGTGATTAACCTCATCGGTGGTGGTTTACAGAAATTGCTTGGCACAGGCC
GTGCAGAATCCCTTTCTGCTACCGCAAACATTTTCGTGGGTATGATTGAAGCGCCGCTGGTGGTGAAACCTTATCTTCAT
AAAATGACCGATTCGCAATTCTTTGCAGTGATGACGGGCGGCTTAGCGTCGGTTGCTGGCGGTACTTTGGTTGGTTATGC
CTCTTTAGGTGTGGAATTGAACTATCTGATCGCGGCGGCTTTCATGTCTGCCCCTGCGGGTCTTTTGATGGCAAAAATCA
TGTTGCCAGAAACCGAACACGTCGATGCCGCGATTGCGCAAGATGAGTTGGATCTGCCGAAATCCACTAACGTCGTCGAA
GCGATTGCGGATGGCGCGATGTCGGGTGTGAAAATTGCTGTTGCGGTAGGGGCGACTTTGCTCGCTTTCGTGAGTGTGAT
TGCTCTGTTAAACGGCTTGCTCGGTTGGTTTGGTGGCTGGTTTGGCATCGAGCTAAGCTTTGAACTGATCATGGGGTATG
TTTTCGCTCCGGTAGCTTGGCTGATTGGTATTCCATGGCATGAGGCGATCACGGCAGGCTCGCTGATTGGTAACAAAGTG
GTGGTGAACGAGTTTGTCGCTTTCATTCAACTGATTGAAGTGAAAGAGCAATTGAGTGCGCATTCACAAGCGATCGTGAC
TTTCGCGCTGTGCGGTTTTGCGAATATTTCTACCATGGCGATTTTGATTGGTGGTTTGGGTAGCCTTGTACCTGAACGTC
GCTCTTTTATCTCCCAATACGGCTTCCGTGCGATTGGCGCAGGCGTATTAGCTAACCTAATGAGTGCATCGATCGCTGGA
GTGATTTTGTCTTTGTGA

Protein sequence :
MGGVMSSLLGMGAILLVAWLFSTNRKNINLRTVSLALLLQIFFALLVLYVPAGKEALNRVTGAVSQLINYGQDGIGFVFG
GLANGSVGFVFAINVLGIIIFFSALISGLYHLGIMPKVINLIGGGLQKLLGTGRAESLSATANIFVGMIEAPLVVKPYLH
KMTDSQFFAVMTGGLASVAGGTLVGYASLGVELNYLIAAAFMSAPAGLLMAKIMLPETEHVDAAIAQDELDLPKSTNVVE
AIADGAMSGVKIAVAVGATLLAFVSVIALLNGLLGWFGGWFGIELSFELIMGYVFAPVAWLIGIPWHEAITAGSLIGNKV
VVNEFVAFIQLIEVKEQLSAHSQAIVTFALCGFANISTMAILIGGLGSLVPERRSFISQYGFRAIGAGVLANLMSASIAG
VILSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
yutK YP_005163383.1 putative sodium/nucleoside cotransporter Not tested Not named Protein 2e-67 49