Gene Information

Name : VC0395_A1388 (VC0395_A1388)
Accession : YP_001217331.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3941
EC number : -
Position : 1491842 - 1492882 bp
Length : 1041 bp
Strand : -
Note : identified by match to protein family HMM TIGR02675

DNA sequence : 
ATGGCTAACAATTTAAAAACGGATATTGTTTTAAACCTCCAGGGTGATCTTGCCCAGAAAGCGCGGTCGTATAGCAAAGA
AATGACAACGCTAGCAACACGTTCAAAAGCTGCATTTAGCATGATTAGTTCATCAGCAATAGCGGCTAGCAGAGGCATTG
ACACTTTCGGTAATCGACTGCTTTTTATTACTGGTGCTGCTGCGGTTGGTTTTGAACGTACATTCGTAAAAACTGCTGCT
GAATTTGAACGTTACCAAACGATGCTAAATAAGCTTCAAGGCTCACCAGAAGCTGGAGCTAAGGCGATGGCATGGATTGA
AGAGTTCACACAAAACACCCCTTACGCTATCGATGAAGTAACACAGTCATTTGTACGTCTAAAAGCCTTTGGTATTGATC
CTATGGATGGGACTATGCAAAGTATCGCCGATCAAGCGGCAATGATTGGCGGTACAGCAGAAACAGTTGAAGGTATCGCT
ACAGCGTTAGGTCAAGCGTGGACTAAAGGAAAACTTCAATCAGAAGAGGCTCTCCAACTACTAGAGCGAGGTGTTCCTGT
TTGGGATTACCTAATTAAATCCAGCAAAGAACTGGGAATGAACAATGGCCGTGGATTTACCAAAGAAGAGCTGGATGATA
TGTCATCTAAGGGAAAGCTAGGTAGGGATGCAATCAGGGCTTTAATTAAGCAAATGGGTAAAGAATCCGCTGGTGCAGCC
AAAGAGCAGATGAATACATGGAATGGTATGATCTCTAACATGGGCGATCACTGGAAGCTTTTTCAAAAAGATGTGATGGG
AAGCGGAGCATTCACAGTTCTAAAAGACCAATTGGGTGAGTTCTTGGGGATGCTTGATGAAATGAAAAAGACTGGCGAAT
ACGACGAGTTTGTCGATAAAGTCGGGCGTGATCTTGTTGAGGCCTTTAAATCAGCCGCTGCTGCTGCAAGAGAAATTAAA
GAGGTCGGTGAGGAACTATGGCCTGTGATTCGAGAGATTGGCTCAATGGCTTGTAGTGGCATAGTGAATTTGGTCACTTA
G

Protein sequence : 
MANNLKTDIVLNLQGDLAQKARSYSKEMTTLATRSKAAFSMISSSAIAASRGIDTFGNRLLFITGAAAVGFERTFVKTAA
EFERYQTMLNKLQGSPEAGAKAMAWIEEFTQNTPYAIDEVTQSFVRLKAFGIDPMDGTMQSIADQAAMIGGTAETVEGIA
TALGQAWTKGKLQSEEALQLLERGVPVWDYLIKSSKELGMNNGRGFTKEELDDMSSKGKLGRDAIRALIKQMGKESAGAA
KEQMNTWNGMISNMGDHWKLFQKDVMGSGAFTVLKDQLGEFLGMLDEMKKTGEYDEFVDKVGRDLVEAFKSAAAAAREIK
EVGEELWPVIREIGSMACSGIVNLVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1791 NP_231426.1 hypothetical protein Not tested VPI-2 Protein 2e-148 100
VC0395_A1388 YP_001217331.1 hypothetical protein Not tested VPI-2 Protein 2e-148 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0395_A1388 YP_001217331.1 hypothetical protein VFG1124 Protein 1e-148 100