Gene Information

Name : VC0395_A1375 (VC0395_A1375)
Accession : YP_001217318.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1593
EC number : -
Position : 1480233 - 1481516 bp
Length : 1284 bp
Strand : -
Note : identified by match to protein family HMM PF06808; match to protein family HMM TIGR00786

DNA sequence : 
ATGGTTGGTTCAATTTTTGGTTGGTTAGGATTGTTATTTGCGGGCATGCCAGTAGGTTTTTCACTTATTTTTGTTGCATT
AGCTTTCCTCATTCTCACCAATAGTACAGGGATTAATTTTGCGGCTCAGCAAATGCTGGGTGGGATCGACAACTTCACGT
TGCTAGCCGTTCCATTTTTTGTGTTAACTGGCCATCTAATGAATAGTGCCGGTATTACAGAAAGAATCTTCAACTTCGCG
AAGTCTCTCGTTGGCCATATTACGGGCAGCTTGGGTCATGTAAATATCATGGCAAGCTTGTTGTTCTCTGGAATGTCTGG
CTCAGCATTGGCAGATGCAGGTGGGTTAGGTCAGCTTGAAATCAAATCCATGCGTGATGCGAAGTATCACGATGATTTCG
CGGGCGGGCTGACAGCGGCATCTTGCATCATTGGTCCTCTGGTGCCGCCATCAGTACCACTAGTCATATACGGTGTGGTT
TCCAATACCTCTATTGGCGCATTATTTTTAGCGGGTGCGATACCTGGTTTGCTGTGTTGTATTGCCTTGATGGTGATGAG
TTATTTTATCTGCAAAAAGCGCGGATATATGACATTGCCTAAAGCGAGCAGACGTGAGCAATTTAAATCACTTAAAGAAG
CATTTTTATCGTTGCTGACACCAGTCATTATCATTGGTGGGATCTTCTCTGGTAAATTTACGCCAACTGAAGCGGCTGCT
GTTTCATCTCTCTACGCACTATTTTTAGGTACAGTTGTTTATAACACGCTCACGTTACAGGGGTTCATCGAAATTCTGAA
AGAAACGGTCAATACCACAGCCGTGGTTGCTCTGATGGTTATGGGCGTGACTGTTTTTGGGTGGATTGTGGCTCGCGAAC
AGTTACCACAGATGTTGGCTGATTATTTCTTAACAATCAGTGATAACCCACTCGTACTGCTTCTGTTGATCAACTTGTTG
CTCCTCTTCTTGGGCACGTTTATTGAGTCATTGGCCTTGCTGTTGCTGCTAGTTCCATTCTTGGTGCCAGTGGCTTCAGC
GGTGGGTATCGATCCTGTTCACTTCGGTGTTATGGCGATTCTTAACCTAATGATTGGCATTCTTACCCCACCAATGGGAA
TGGCTTTATATGTGGTTTCTCGAGTCGGAGATATCCCATTCCATACGCTTACGCGTGGTGTTTTACCACTACTGGTGCCG
CTATTCATCGTGTTGGCGCTGGTGGCGGTATTCCCTCAATTTACTCTGCTACTACCGGAATTATTCCTCGGATACGGACA
GTAG

Protein sequence : 
MVGSIFGWLGLLFAGMPVGFSLIFVALAFLILTNSTGINFAAQQMLGGIDNFTLLAVPFFVLTGHLMNSAGITERIFNFA
KSLVGHITGSLGHVNIMASLLFSGMSGSALADAGGLGQLEIKSMRDAKYHDDFAGGLTAASCIIGPLVPPSVPLVIYGVV
SNTSIGALFLAGAIPGLLCCIALMVMSYFICKKRGYMTLPKASRREQFKSLKEAFLSLLTPVIIIGGIFSGKFTPTEAAA
VSSLYALFLGTVVYNTLTLQGFIEILKETVNTTAVVALMVMGVTVFGWIVAREQLPQMLADYFLTISDNPLVLLLLINLL
LLFLGTFIESLALLLLLVPFLVPVASAVGIDPVHFGVMAILNLMIGILTPPMGMALYVVSRVGDIPFHTLTRGVLPLLVP
LFIVLALVAVFPQFTLLLPELFLGYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein Not tested VPI-2 Protein 7e-158 100
VPI2_0025c ACA01842.1 TRAP dicarboxylate transporter DctM subunit Not tested VPI-2 Protein 5e-158 100
VC1777 NP_231412.1 hypothetical protein Not tested VPI-2 Protein 7e-158 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0395_A1375 YP_001217318.1 hypothetical protein VFG1110 Protein 3e-158 100