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Name : VC0395_A1355 (VC0395_A1355) Accession : YP_001217299.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Resistance Product : AcrB/AcrD/AcrF family transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG0841 EC number : - Position : 1445543 - 1448593 bp Length : 3051 bp Strand : + Note : identified by match to protein family HMM PF00873 DNA sequence : ATGGATATTGCACGTTATACCCTTGCCAAACGCACCAGCGTTTGGGTGCTGATAGCCCTAACCTTGATTGGCGGCTACAT CAGCTACCTCAAATTGGGTCGTTTTGAAGACCCTGAGTTTGTGATTCGCCAAGCGGTGATTGTGACGCCTTATCCGGGTG CCACCGCGCAAGAAGTTTCCGATGAAGTGACCGATGTCATCGAAGGTGCGGTGCAAGCGCTGCAAGAGCTAAAAGAAGTC AAATCGGTTTCGATGCAAGGCCGCTCTGAAGTGACGGTAGAAATCAAACTCGAATTTGCCAAATCCTCCGCGCAGTTGCA GCAGGTATGGGACAAATTACGCCGTAAAGTCGCGGATGCGCAGCGCCAACTGCCTCCCGGTGCCGGCGCTTCAATCGTTA ACGATGACTTCTCTGACGTGTACGCGCTGTTTTATGCGGTAACTGGGGAAGGCTTTAGCGACAAACAGCTCCAAGACTAC GTCGATACGCTACGCCGTGAACTGGTTCTGGTGCCGGGTGTGGCCAAAGCCGCTACGCTGGCCGAGCAGCAAGAAGCAAT CTTTATCGAGATGTCCAGCGAACGCATGGCGGAATTTGGCCTTTCGGTTGAACGCGTATTGCAAGTGCTACAAAAGCAGA GCCTAGTCACCGTTGCAGGCAGCGTCGATGCTCAGCAGATGCGCATTCCGGTGATCCCTAAATCCAACATCAGCTCCTTG GCTGACCTGACTAATTTGCAAGTGGCGGTCGGTAGCAACAATGCGGTGGTACGCCTAGGTGATATTGCCAACATCAGCCG TGGCTACACCGAGCCAGCATCGATGCTGATGCGCTATAACGGTCAGCGTGCAATTGGCTTTGGTATCTCGAATGTCACCG GCGGTAACGTGGTCGAGATGGGCGATGCCGTCAAAGCACGCTTGGCTGAACTTGAAAGCCAGCGTCCACTGGGCATGGAT CTGCATGTGATTTCGATGCAGTCTGACTCGGTGCGCGCTTCGGTGGCCAATTTTATCGATAACCTGATTGCCGCTGTCGC CATCGTGTTTGTCGTGCTCTTGCTGTTTATGGGCGTACGCTCAGGTGTCATCATCGGTTTTGTTCTATTGCTTACCGTTG CCGGTACCTTATGTGTGATGCTGATTGATGACATCGCCATGCAGCGGATTTCGCTCGGCGCGCTCATCATCGCCCTCGGC ATGTTGGTGGATAACGCGATTGTGGTTACCGATGGCGTACTCGTGCGGTTTCAGCAAGAGCCGAACGCCGATAAACAGCA AGTGGTCTCTGAGGTGGTCAATGCCACAAAATGGCCACTGCTGGGCGGTACGGTGGTGGGCATTTTTGCCTTCAGCGCAA TTGGCCTCTCCCCTTCCGATATGGGCGAATATGCTGGCTCACTGTTTTGGGTGATCCTCTACTCGATGTTTTTGAGTTGG GTGTTTGCGGTGACCGTCACCCCCATGCTGTGCCATGACTTTCTACGCGTTAAAGCTCCCACCAAAGAGGCGAAACCGTC TAAATTGGTGACGGGTTATAAAGCCGTACTGCAATGGGTGTTAAGCCACCGCGTGGTCAGCTGTGCGATGCTGCTCGGCA CCTTAGTAGCTGCGGTGTGGGGCGCTCAGTTTATTCCGCCGGGCTTTATGCCAGAGTCGCAACGACCACAATTTGTGGTG GATGTGTACTTGCCACAAGGCTCGGATATTCGCCGCACCGAACAGGTTGTCGCCAGCATTGAGAAAGACGTGACGCAAAA AGACGGTATTACCAATATCACCAGTTTCATCGGCGGTGGTGGCCTGCGTTTTATGCTGACCTACTCACCCGAGGCGCGTA ACCCAAGTTACGGCCAACTGCTGATTGATATTGATGACTACACCAAAATTGCCCCATTAGTAGGCGAGTTGCAAAATGAG CTGGATGCCAAATACCCTGATGCCTCAATCAAGGTGTGGAAGTTTATGCTCGGTCGCGGCGGCGGCAAGAAAATTGAAGC CGGTTTCAAAGGCCCAGACAGCCACGTGCTACGCCAATTGGCCGAACAAGCCAAAGCAATTATGCATAACGACCCGAACT TGATTGCGGTGCAAGATGACTGGCGTCAACAAGTGCCGGTATTGCAACCCGTGTATTCCGCACAAGAAGCACAGCGCCTT GGCTTAACCACGCAAGAAATCAGCGCCGCGATCGCGCAAACGCTCAATGGCCGTAATGTTGGGGTGTATCGCGAAGGCAA TGACTTGATCCCGTTGATGGTTCGCGCACCAGAAAATGAACGCCACCACGAACGTGCGATTGAAAACAGTGAAGTGTTCA GCGCGCAAGCTGGCCGTTACATTCCGGTGAGCCAACTGGTGGATTCGGTCGATACTGTCTATCAAGATGCCTTACTGCGC CGTATTAACCGCATGCCGACCATCTTGGTACAAGCTGACCCAGCGCCGGGTGTGATGACGGCCGATGCGTTCAATAATGT GCGCGAAAAAATCGAGCAGATTGAGCTACCAGCTGGCTATGAGCTGATTTGGTACGGTGAATACAAAGCCTCGAAAGACG CCAATGAAGGTTTGGCGCTCTCCGCTCCTTATGGCTTTGCGGCGATGATTCTCGCGGTGGTGTTTATGTTTAACGCGCTG CGTCAGCCACTCGTGATCTGGATGACCGCACCCTTTGCCGTTGTGGGTGTCACCATTGGCCTTATCGCCTTTCAAACTCC GTTCGAGTTTATGGCGATCCTCGGCTTTTTAAGCTTGATTGGTATGATGGTGAAAAACGCGATTGTGTTGGTTGACCAAG CGGATGCGGAAATTCGAGCAGGTAAAGAAGCTTACTTCGCGATCATTGATGCGGCGGTGAGCCGTGCACGCCCGGTTCTG CTCGGCGCATTCACCACGATTTTAGGGGTAGCGCCTCTGCTGGTAGACCCATTCTTTAAGAGTATGGCGGTCACCATTAT GTTTGGTTTGCTGTTTGCTACCATTCTGACCTTAGTCGTGATCCCGCTCTTCTATGCCGTGCTGTTTAGAGTGAAAGTCG CCAAAGCATAA Protein sequence : MDIARYTLAKRTSVWVLIALTLIGGYISYLKLGRFEDPEFVIRQAVIVTPYPGATAQEVSDEVTDVIEGAVQALQELKEV KSVSMQGRSEVTVEIKLEFAKSSAQLQQVWDKLRRKVADAQRQLPPGAGASIVNDDFSDVYALFYAVTGEGFSDKQLQDY VDTLRRELVLVPGVAKAATLAEQQEAIFIEMSSERMAEFGLSVERVLQVLQKQSLVTVAGSVDAQQMRIPVIPKSNISSL ADLTNLQVAVGSNNAVVRLGDIANISRGYTEPASMLMRYNGQRAIGFGISNVTGGNVVEMGDAVKARLAELESQRPLGMD LHVISMQSDSVRASVANFIDNLIAAVAIVFVVLLLFMGVRSGVIIGFVLLLTVAGTLCVMLIDDIAMQRISLGALIIALG MLVDNAIVVTDGVLVRFQQEPNADKQQVVSEVVNATKWPLLGGTVVGIFAFSAIGLSPSDMGEYAGSLFWVILYSMFLSW VFAVTVTPMLCHDFLRVKAPTKEAKPSKLVTGYKAVLQWVLSHRVVSCAMLLGTLVAAVWGAQFIPPGFMPESQRPQFVV DVYLPQGSDIRRTEQVVASIEKDVTQKDGITNITSFIGGGGLRFMLTYSPEARNPSYGQLLIDIDDYTKIAPLVGELQNE LDAKYPDASIKVWKFMLGRGGGKKIEAGFKGPDSHVLRQLAEQAKAIMHNDPNLIAVQDDWRQQVPVLQPVYSAQEAQRL GLTTQEISAAIAQTLNGRNVGVYREGNDLIPLMVRAPENERHHERAIENSEVFSAQAGRYIPVSQLVDSVDTVYQDALLR RINRMPTILVQADPAPGVMTADAFNNVREKIEQIELPAGYELIWYGEYKASKDANEGLALSAPYGFAAMILAVVFMFNAL RQPLVIWMTAPFAVVGVTIGLIAFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADAEIRAGKEAYFAIIDAAVSRARPVL LGAFTTILGVAPLLVDPFFKSMAVTIMFGLLFATILTLVVIPLFYAVLFRVKVAKA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 100 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | BAC0425 | Protein | 0.0 | 100 |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | BAC0519 | Protein | 0.0 | 44 |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | BAC0428 | Protein | 0.0 | 43 |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | BAC0526 | Protein | 0.0 | 41 |
