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Name : gabD (VC0395_A1344) Accession : YP_001217289.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 1433345 - 1434811 bp Length : 1467 bp Strand : - Note : identified by match to protein family HMM PF00171; match to protein family HMM TIGR01780 DNA sequence : ATGAGGAGTCTTGCCATGTTACCGACCGATTTTCCATTTTTTCACCAAAGCGCCTTTATTAATGGGCAGTGGATTTTAGG TGAGCCACAGGCAAGGCAAACGGTAACCAATCCGTTTGATGGCTCCCTCATTGGCTCTGTTCCTTTATTGAGTGCGGCTC AGGTGCAAGAAGCGATTGCCGGTGCGCAAGCGGCGCAAATTTTATGGTGCCAGCAACCCGCTGAAAATAAAGCAAAAATT TTGCGCCGTTGGTATGAGCTTATTGAACAGCATCATGAATCATTGGCGAAGTTATTAACTATTGAACAAGGTAAACCGCT GGCAGAAGCCAGAGGAGAAATTCACTACGCCGCCAGTTTTGTTGAATGGTATGCCGAAGAGGCCAAACGTGCATATGGCG AGCTGATCCCATCCCATAAACCTGATGCGCGAATTATGGTTTCACGTCAGCCTGTTGGCGTTGTTGCCGCGATTACGCCT TGGAATTTCCCCGCCGCCATGATTACCCGTAAATGTGCCCCTGCCTTTGCAGCTGGTTGCGCTGTGGTTTTAAAACCAGC GCCGGATACGCCGTTCACGGCTTTAGCTTTGGCCGATCTTGCGCAGCAAGCGGGAATCCCTGATGGTTTATTGCAAGTGG TGACGGGCGATGCGATTGAAATCGGGCGTGTACTGACGGAAAGCAAAACGGTACGCAAACTCTCATTTACTGGCTCAACC GGGGTTGGCAAGCTTTTGATGGCACAATCGGCCAATAACGTGAAAAAACTCTCGCTTGAGCTGGGAGGAAATGCGCCGTT TATTGTGTTCGAAGATGCGGACATTAATGCCGCGATTGATGGTGTGATGGTGGCGAAATTTCGTAATGCTGGACAAACTT GCGTGTGCGCTAACCGGATTTATGTGCATGACGCGGTATATGATCAATTTGCTGCCAAGTTGGTGGATCGGGTCAGCAGA CTCAACGTCGGTTATGGTTTGGATGCCGGTGTAAACATCGGTCCGCTGATTAATGATGCCGCGGTTGCTAAAGTCACATC ACATATAGTGGATGCCCAAAGCAAAGGAGCGAAAGTGATGTTTGGTGCGTTGCCTGAAGCGGGCAGCCGTTTATTCCAGC CACACGTGTTAACCGAAGTGACCGACGAAATGCGCGTTGCTGACGAAGAAACCTTCGGCCCCTTGGCCGCACTGTTTCGT TTTAGCTCTGAGCAAGAAGTGATCGAGCGAGCCAATGCGACCGATTCGGGTTTGGCCGCTTATTGTTATACCCAATCTTT GCGCCGGGCATGGCATATGAGTGAAGCACTTGAAGCGGGGATTGTCGGCATCAACGAAGGGTTGATTTCCACTACGTTAG CGCCTTTTGGTGGCATCAAAGAGTCGGGTCTTGGTAGAGAAGGGGCGAAACACGGCCTTGAAGAGTACCTTGAAGTCAAA TATACCCTTATGGGTGGACTAGCTTAG Protein sequence : MRSLAMLPTDFPFFHQSAFINGQWILGEPQARQTVTNPFDGSLIGSVPLLSAAQVQEAIAGAQAAQILWCQQPAENKAKI LRRWYELIEQHHESLAKLLTIEQGKPLAEARGEIHYAASFVEWYAEEAKRAYGELIPSHKPDARIMVSRQPVGVVAAITP WNFPAAMITRKCAPAFAAGCAVVLKPAPDTPFTALALADLAQQAGIPDGLLQVVTGDAIEIGRVLTESKTVRKLSFTGST GVGKLLMAQSANNVKKLSLELGGNAPFIVFEDADINAAIDGVMVAKFRNAGQTCVCANRIYVHDAVYDQFAAKLVDRVSR LNVGYGLDAGVNIGPLINDAAVAKVTSHIVDAQSKGAKVMFGALPEAGSRLFQPHVLTEVTDEMRVADEETFGPLAALFR FSSEQEVIERANATDSGLAAYCYTQSLRRAWHMSEALEAGIVGINEGLISTTLAPFGGIKESGLGREGAKHGLEEYLEVK YTLMGGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 1e-127 | 60 |
