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Name : pspF (VC0395_A1284) Accession : YP_001217228.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : psp operon transcriptional activator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 1365125 - 1366141 bp Length : 1017 bp Strand : + Note : identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; match to protein family HMM TIGR02974 DNA sequence : ATGCAACAGAGCTTGCTCGGAGAGTCACCTGCGTTTTTAGCGGTGTTAGACAAAGTCTCACGTTTGGCGCCGATCGATCG TCCTGTGCTGATCATTGGCGAGCGCGGAACGGGTAAAGAGTTGATCGCCCAGCGCTTGCACTATTTATCAAAACGTTGGG AACAACCGCTGGTGTCGCTAAACTGCTCAACGCTCAGTGAAGGGCTGATCGATTCAGAGCTGTTTGGCCATGAATCAGGC TCGTTTACTGGAGCCAAAGGACGCCATCAAGGACGTTTTGAACGTGCCGAAGGCGGTACGCTGTTTTTAGATGAATTGGC CACTGCACCACTCTCAGTGCAAGAAAAACTGCTACGCGTGATCGAATACGGCCAATATGAACGTGTCGGTGGCAACCAAG TATTAAACGCGAATGTGCGCTTGGTATGTGCAACCAACGCGAATTTACCGCAAATGGCTCAGCAAGGCACATTTCGCGCA GACTTACTGGACCGACTGGCGTTTGACGTGATTCATTTGCCCGCACTTCGCCATCGACCAGAAGATATTGCGCTGCTTGC CGAACATTTTGCTATTCGCATGTGCCGTGAACTACAAGTGCCACTCTTTGTTGGCTTTAGCCCCAATGCATTACACCAAC TGCAAGCCTACTCTTGGCCGGGCAATGTGCGTGAGCTGAAAAACGTGGTGGAGCGCGCGGTGTATCAACATGGGTTGAAT AGCCAACCAATTGAACAGTTAGTCTTTAACCCGTTCCAATCTAGTGACATTGTCACCGACGTATCTGAGCAGGTGGACGT TCGCCATACCACTCGTACCGACTTCCATTTGCCTCTTGACTACAAGGCATGGCAGCAACAGTGTGATATTGAGTTGTTAC AAGCGGCACTCACGCAAGCGAAATTTAATCAAAAGCACGCCGCGCAGTTGCTGGGACTCAGCTATCATCAATTTCGAGGC ATGATGAGAAAGTACCCACAAATGAACAGTGAAAACGCCTCACCTCACGTTGAGTGA Protein sequence : MQQSLLGESPAFLAVLDKVSRLAPIDRPVLIIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTLSEGLIDSELFGHESG SFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRA DLLDRLAFDVIHLPALRHRPEDIALLAEHFAIRMCRELQVPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLN SQPIEQLVFNPFQSSDIVTDVSEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQAALTQAKFNQKHAAQLLGLSYHQFRG MMRKYPQMNSENASPHVE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 4e-33 | 41 |
