Gene Information

Name : VC0395_A1242 (VC0395_A1242)
Accession : YP_001217186.1
Strain :
Genome accession: NC_009457
Putative virulence/resistance : Unknown
Product : DEAD/DEAH box helicase
Function : -
COG functional category : K : Transcription
COG ID : COG1061
EC number : -
Position : 1314085 - 1316058 bp
Length : 1974 bp
Strand : +
Note : identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851

DNA sequence :
GTGGCCTCTTTGCGCGTTGTACCGAGCGCATCACACAGGAATTTGTCTAAACGCATGCTTACCTCATCTGCTGGAAGTCG
GCTATTATACAGACCTCACACAATAATTACCCAGCGCAATTGCTTGCGGCCGACATCAAACGATGCAAAAGCCGTCAATT
GCCCAGATAACCTCGGTAACTCCCAGCGGATGTATACGTTACGACCTTATCAAGCCGACTCAGTGAAAGCCGTCGTGCAC
TATTTTCGCCAGCACTCTACCCCGGCCGTGATTGTGCTTCCGACCGGCGCAGGAAAAAGCTTAGTGATCGCAGAGCTTGC
GCGCCTTGCCCGTGGCCGCGTATTGGTGTTGGCCCATGTCAAAGAGTTGGTTGAGCAAAACCACGCCAAATATGAAGGCT
ATGGCTTAACCGGCGCGATTTTTTCCGCAGGCTTGGGGCGCAAAGAAACCGATCAACAAGTGGTGTTTGCCTCAGTGCAA
TCGGTGGTGCGCAACTTATCTGAGTTCCAAAACCAGTTCTCTTTATTGGTGATTGATGAGTGCCACCGCGTCCCCGATGA
CAAAAACAGCAGTTATCAAAAAGTGATCACGCATTTGCTGGAACTCAATCCGGGCATGAAAGTGCTCGGACTGACCGCAA
CCCCCTATCGACTCGGGATGGGATGGATTTACCAGTATCACACTCGTGGTTTAGTGCGCAGTGAAGAGCCGCGTTTTTTC
CGCGACTGTATTTTTGAGCTCCCCATTCACTATTTATTGGATGAAGGTTTTCTCACCCCCGCTCAATTGATTGATACCCC
CGTCATGAGCTATGACTTTTCGCAGTTGAAACCAGCCAATACCGGGCGCTATCGTGAATCAGAACTCGACTTGGTGATTG
AGCAGTCACAGCGCGCCACTCCGCAAATTGTTGCCCAGATCATTGAGCTTGCCAAAGCGCGACAAGGGGTGATGATTTTT
GCGGCGACCGTGCGTCACGCCGAAGAGATCTACCGTTTACTGCCTACCGAGCACGCTGCTTTAGTGATCGGTGATACCCC
GACGCCAGAGCGTGATCGCATTATCCAAGCGTTCAAACAACAACAGATTAAGTTTTTGGTCAATGTGTCCGTGCTCACTA
CCGGATTTGATGCGCCGCATGTCGATTTGATTGCGATTTTAAGGCCAACGGAATCGGTCAGTCTCTATCAACAAATTGTC
GGCCGCGGGCTACGCCTTGCGGCGGGCAAATCCGACTGTTTGGTGCTCGACTATGCGGGTAATCAGTACGATCTGTATCA
ACCTGAAGTGGGCGATCCGAAACCCGATTCAGACAGCGAAATCATCACCATTCCCTGCCCCGCTTGCGGTTTTAACAATA
ACTTTTGGGGCAAGCTCGATGCGAACGGCTTTCTGATTGAGCACTATGGCCGCCGCTGCCAAGGCTATTTCACCGATGAT
GAGACGGGTGAGCGCGAGCATTGTGGCTACCGTTTTCGTGCGAAATACTGCAATGAATGTGGTGCGGATAACGACATCGC
CGCTCGCATCTGCCATGAGTGTGACACCACGTTAGTGGACCCCGATAAGAAACTCAAAGAGGCACTCAATCTTAAAGATG
CGCTGGTGTTTGAATGTACCGACATGAGCCTAAAAGTTCATAAAGACGCCAAAGGGAAAAGCCAGCTTCAAGTGACTTAC
CACGGGCAAGATGCGGTGCAAGTACACCAGTTTTGGCCACTGAATACGCCGCGCCAAAAGCAGCAATTTCACGACCAATT
TGTACGTCCACATCTGGCTGACAAACATCGGCCTTTTGAGGCAGCAACGCCCGCCAAAGTCGTGGATCATCAGCACCGTT
TTCGGCCACCCCTGTTTGTGATTGCGCGAAAATCGGGCCGCTTTTGGACCATTCGCGACAAAGTATTTGCCGATGAGTTC
GCCTCCCCAATCGACGTTCACTTATCAAACCGAGCTTATACCATTCCTACTTGA

Protein sequence :
MASLRVVPSASHRNLSKRMLTSSAGSRLLYRPHTIITQRNCLRPTSNDAKAVNCPDNLGNSQRMYTLRPYQADSVKAVVH
YFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKELVEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQ
SVVRNLSEFQNQFSLLVIDECHRVPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFF
RDCIFELPIHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQIVAQIIELAKARQGVMIF
AATVRHAEEIYRLLPTEHAALVIGDTPTPERDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIV
GRGLRLAAGKSDCLVLDYAGNQYDLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDD
ETGEREHCGYRFRAKYCNECGADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSLKVHKDAKGKSQLQVTY
HGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFEAATPAKVVDHQHRFRPPLFVIARKSGRFWTIRDKVFADEF
ASPIDVHLSNRAYTIPT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01052 YP_001437156.1 hypothetical protein Not tested Not named Protein 4e-157 61