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Name : VC0395_A1059 (VC0395_A1059) Accession : YP_001217005.1 Strain : Genome accession: NC_009457 Putative virulence/resistance : Virulence Product : RTX protein Function : - COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism COG ID : COG2931 EC number : - Position : 1106372 - 1114318 bp Length : 7947 bp Strand : + Note : identified by match to protein family HMM PF07819 DNA sequence : GTGAACCGTTTGCAAATTAACGCAGGTATTCGAGCGAAAAACAGCGTTAGCAGTATGACTTCTATGTTCTCTGAAACAAA TAGCAAGAGCATTGTTGTTCCTACCAAAGTCTCGCCTGAACCAGAGCGCCAAGAAGTGACTCGTAGAGACGTCCGTATCT CAGGGGTGAACCTCGAAAGTCTAAGTGCGGTACAGGGAAGTCAACCAACGGGTCAACTGGCTTCGAAAAGTGTCCCCGGA TTTAAAAGCCATTTCGCATCGACATCCATTGGTATAGAAAATGAGTTATCCGGTCTGGTGGTGGTTTTACCGAAAAACTC AGCGCAGACTTTTGGCTATGTGCATGATTCACAAGGTAACCCATTGTTCATGCTAACCAAGGATATGAATCAAGGTGGTT ATAGCAACCCAGTGGGTATCAATGATATTCAAGGGGTGAACAACTGGCAGACGCATACGATTGAACTGGTTACATATCCT AGTGAAATCAGTGATACAGCAGCGGTTGAAAGTCGTAAAGAGGCAATGCTATGGCTTGCGAAAGAGTTTACCGATCATAT CAATCAGTCTAACCACCAAAGCTTACCTCATTTAGTGAGTGATGACGGTCGTTTCACTCTGGTTATATCGAACTCTAAGC ATCTTATTGCGGCGGGTAACGGAACCTCTATTGATGCACAAGGCAAGACCATAGGAATGACCCCTAGTGGCCAACAAGCA ACAATGGCGATCAGTGCGAAAGAATTTGGTACAAGCTCGTCGCCGGAAGTCAGACTGCTTGAATCTGCGCCTTGGTATCA AGCAGGGTTGAGAGATGAGTTTTTAGCAAACGCGAAAAACACCACGTTGGATGATCCCGCTACAGCACAAAATGTGTATG CCTATCTCACGTCTGTCTATTCAAAAACAGCAGATTTGGCCAAAGAGTATGGGATCTACATCAATGATTGGGATCCTGCC TCTGAAGGTTTTTCACCGAATGCTCAAGGGTTAACGGATCCGAAAGTCAAAAATGCTTGGAGCATATTGCCAAGAACTAA ACCCGTTAGAATGCTGGAACTTCTGAGTGCGGAAGACTCACGCTACGTAAGGCAACAAATTGCGGAAAAGCTGAAAGGCA CCTATTCAGAAAGCCTTGCTAAGAACGTGTTTGAATACTTCCAATATGGTGGAGAAGTCGCTGGACATGGAATCAATAAT GCGACGACAGGAAGTGTGCAACAGCCTGAACCAGCGATCTTATTTGAGTTTCGCAGTGTACCGAGTGCATTAAGTGACTT TGTACCCAAAACAGCGTCAACGGTGAAAGTGGATGTTAAGGCACTCGATCATTTTGACTCGGCAAGCCGTAAAGCCATCA TTACTGAAGTAAATGCTTTGGTTAGCGGTAGTGAGGATTTCGATGCTTGGTATCAGGAGTATCGAGCAAGCAAAGGACAG CCGCCAGTCAAAAATCCTAAGTCCAGTGCATCCGCCAATCACAAAGCTGAATGGTTGATGACGCAGCATGCTGAACAATG GGCGAAAATTACCGCTCCTTATACTGATAACCATGAGACGCTCACATCTACCAAGCTTGCTTCTAACGATAAAGAAGAAT TACACGCTTTAGGTGAAACGTCGAATCTAGAGAATAACAAGCAGCAAGAAAACGTCGCTTCCATAATTAACACCATGTTA AATGACATGCTGCCATTCTATGCACTTCGTACCGAACGAAATCTACTGGTACAAGAAGGAGATGAAGGCTTCGAAGTGCG TGCTTGGCCAGGAACCGAAGACAAGAGTAAAACCATTATTCTTGAGGATCCTGAAGACGCGGCTCAGCACAAAGCCATCG AACGCTTCATTCTGGCCAACTTCGATAATTTCGAACAAATGCCAGACGAGCTCTTCTTGGTGGATAACAAAGTGATTTCA CACCATGAAGGTCGTACACATGTGTTGGCGCAAAAAGTCGATGGTGCATGGCAATACAACGCCACAGTCGAGCTGATGTC AGTCACTGAACTACTGGATGCGGCGAATGTAACGGGTAAGATCCGCGGTGAAAGCTATCAGCAAGTGATCGACGCATTGA CTGATTACCACGCCAGCATCACTGAGCACGCAGATTATGAACCGGAGTCCGTGGAAAAACTGCTCAACTTGCGTAAAAAA ATTGAAGGTTATGTACTCGGACACCCAGACTCAGGCCGTGTTGAAGCGATGAATTCACTGTTAAATCAGGTGAATACGCG TTTAGATGAAGTTTCACTGCTGTCAGTTGCTGAGCAAACTATCCAAGCGCAAAACAGTTTCAGCCGACTATATGACCAGC TAGAAGCCGCTAACTTGAAAGAGAGTAAGCACCTTTATCTGGATCAAAATGGTGACTTTGTTACCAAAGGCAAAGGTAAT CTTGCCAATATCGATCTGCTAGGTAGCCGCGAAGCTGTGCTTGAAAAAGTGAAGTTAACAGTAAGTAACGAGTACGGTCA AACCGTTGCGGATACAATTTTTGCTGGATTATCAGCCAAAGATCTTGCCAAAGACGGTAAAGGGGTTGATATCGCGGGTT TGAATAAAGTACATCAAGCGATTGAACAGCATCTGTCACCTGTCAGCGCCACGTTGTACATTTGGAAACCGAGTGATCAT AGCGCGCTAGGTCATGCCGCATTGCAAATAGGCCAAGGTCGCACGCAACTTGAAGGTCAAGCTGCAGCTGATTTTAACCA GCAAAATTACGTAAGCTGGTGGCCACTAGGCAGCAAGTCATCCAATATCAGCAATATCTTGAATGTGGCCACAAAAGACC AACCTGATCTTAAGCTGCGCTGGAGCGACTTCAGTCAACCTGCACATCAAAATGACACGCTTGAGCATGATGTTGCTTCG GAAGAAAACGATGGCTTTGGTTTGCATGATGGCGACATTAAGCTGAAACGCTTTATCGAGAAGCTCAATGCCGCGAAAGG AATTGACGCTTCATTTAAAGAGGCTTCTGAAGGTTACGCGAGCGTACTACTGGGTAACCCAGATATGCTCGAAACGACAG GTATTCCTGCACATGTTTTCCAACCATTTGTCGAACAATGGAATGACACCAGTTATGACATGATGGACGTGGCACACCGT TTTGCGCAAGAGCTCAGACTACAGGCTCAAAGAAGTGACGATCCCGAACTGCTTGAAAAGCGCATCGGCAATGTGATTCG CCAATTTGCAGAAAGAGCACTGGAAGAGATCGAAACCTTCAAAGCAAGCCAAGCCGATCAAGGTCGAGTATTCCGAATTA ACCTTGAAGGCCTCGATGTGGCGGCAATGCAAGCAGAATGGCATCGTCTAAGCAACGATCCGGATGCTCGTTATCAATTA CTGACCAAAAACTGCTCCAGCACAGTGGCTAAAGTGTTGAAAGCCGGCGGGGCGGATAAACTGATTGGCCATACATGGCT GCCTAAGTTTGGTGTTTGGACGCCGACCGAGCTTTTCAACTTTGGTCAGGCACTGCAGGAAGCTCAGCTGGAAATTGCCG CGAAGAAGCAAAGTCATCAAGTCACTGATGTCCTTGATGCCTTGTCAGGCAATGAGAAGCCTAAAGAAAACGTGGCGATT GAAAATGATGGTACGCCACCGCGCGATAAAGAATCTCTGAGCCCATTGACTCGATTCCTCAATAACGAGTTGTATGGTGA TAAAGAGGCTCGCCGTAAGATTGGCGAAATCACGCAAACCCTACTTGATCACGCGGTGGAAAAAGGTGAATCGCAGAAAA TCACTCTGCAAGGAGAAGCGGGCCGTCTAACGGGGTATTACCATCAGGGAACAGCCCCAAGCGAAGGTGAAACGAGCTCG CCAAGCGGCAAAGTCGTATTGTTCCTGCACGGTTCTGGTTCTTCTGCTGAAGAGCAAGCGAGCGCGATTCGAAATCACTA CCAGAAGCAAGGTATCGATATGCTCGCAGTCAACCTGCGTGGCTATGGTGAAAGCGACGGTGGACCAAGCGAAAAAGGCT TGTACCAAGATGCTCGCACCATGTTCAACTACCTAGTGAATGATAAGGGTATTGACCCAAGCAACATCATCATTCACGGC TACTCAATGGGCGGTCCAATTGCCGCAGATTTAGCACGTTATGCCGCGCAAAACGGCCAAGCGGTGTCTGGCTTATTGCT TGACCGTCCTATGCCAAGCATGACCAAAGCAATCACCGCTCACGAAGTGGCGAATCCAGCGGGCATTGTGGGGGCTATCG CGAAAGCGGTTAACGGCCAGTTCTCTGTAGAGAAAAATCTCGAAGGTTTGCCAAAAGAGACATCCATTCTGCTGTTGACC GATAACGAAGGTTTGGGTAACGAAGGTGAGAAACTTCGTACCAAACTCACTGCCTCTGGTTACAACGTCACTGGCGAGCA GACATTCTATGGTCACGAAGCAAGCAACCGTTTGATGAGTCAATATGCGGATCAAATTGTCTCCGGTTTGTCCAGCAGTG CAAGTGTAGATGAAGACCTAGATCAACAAGGGTTGGATACCACATCAACCAAGGATCAAGGTATCTCAAATAAGAATGAT CATCTGCAAGTGGTGGATAGTAAAGAAGCATTAGCGGATGGAAAAATACTCCATAATCAAAATGTTAATAGCTGGGGCCC GATTACGGTTACACCAACGACAGATGGTGGTGAAACCCGCTTCGACGGTCAAATCATCGTTCAAATGGAAAACGACCCGG TAGTAGCAAAAGCGGCAGCCAATTTAGCAGGTAAACATGCTGAAAGCAGTGTGGTGGTGCAGCTCGATTCAGACGGCAAC TATCGCGTGGTGTATGGCGATCCGTCAAAACTGGATGGAAAGCTACGTTGGCAGTTGGTGGGGCATGGTCGCGACCACTC AGAAACTAACAATACTCGCTTAAGTGGTTACAGTGCCGATGAGTTGGCCGTGAAATTGGCCAAGTTCCAACAGTCGTTTA ATCAAGCCGAAAACATCAACAACAAACCGGATCACATCAGTATTGTTGGTTGTTCTTTGGTGAGTGACGACAAGCAAAAA GGCTTTGGTCATCAGTTTATTAACGCGATGGATGCGAATGGTCTTCGTGTCGATGTCTCTGTTCGTAGTTCTGAACTGGC CGTAGACGAGGCGGGACGTAAGCATACCAAGGACGCGAATGGCGATTGGGTTCAAAAGGCAGAAAACAACAAAGTTTCGC TAAGCTGGGACGCGCAAGGTGAAGTTGTTGCCAAGGATGAACGTATTCGCAATGGTATTGCGGAAGGCGACATCGATCTC TCTCGTATTGGTGTCAACAATGTCGATGAACCTGCTCGTGGCGCGATCGGTGACAATAATGACGTGTTTGATGCGCCAGA AAAACGCAAACCAGAAACGGAAGTGATTGCCAATTCTAGCAGCAGTAATCAATTCAGCTACTCAGGTAACATTCAAGTTA ACGTGGGCGAAGGGGAGTTTACGGCGGTGAACTGGGGGACATCGAATGTGGGCATTAAAGTCGGTACTGGTGGCTTTAAA TCGCTGGCCTTTGGTGACAATAACGTTATGGTTCATATCGGTGACGGTGAAAGCAAACACAGTGTTGATATCGGTGGCTA TCAAGCACTGGAAGGTGCGCAAATGTTCCTCGGTAACCGTAATGTGAGCTTTAATTTCGGACACAGTAATGATCTGATCC TAATGATGGATAAGTCGATCCCAACTCCACCACTCGTCAATCCATTCGACGGTGCCGCACGTATTTCTGGTGTGTTGCAA GGTATTGCTACGTCTGGAGAGGGAGAAGATTGGCTTGCCGCTCAAGAGCAGCAATGGACACTGTCTGGCGCGAAGAAGTT CGTCAAAGATATGTCTGGTTTGGATCAAAGTAGCAGTGTGGATTACACCACATTAGTTGAATTGGATTCACAAAATGAAC GTGATAGCCGTGGCCTGAAGCACGATGCAGAAGCGACACTGAATAAGCAATACAATCAGTGGCTAAGCGGTAACGGTAAT AGTGGCACGAGTCAGCTCAGCCGCGCTGATAAGCTTCGTCAAGCCAATGAAAAGCTAGCATTTAACTTTGCCGTAGGTGG ACAAGGGGCGGATATTCAAGTCACGACGGGTAACTGGAACTTTATGTTCGGCGATAACATTCAGTCGATTTTGGATACCA ACTTAGGTTCACTGTTTGGTCTCATGACGCAGCAGTTCACCGCAACGGGACAAGCAAAAACCACCTTCACTTATACGCCA CAAGATTTGCCGCGCCAGCTCAAGAATAAGCTACTCGGCCAGTTAGCTGGAGTAGGGGCTGAAACGACATTGGCGGATAT TTTTGGTGTGGATTACACCGCGTCAGGTCAAATTGTTTCGCGTAATGGTCAAGCCGTCGATGGAGTGGCGATTCTCAAAG AGATGCTGGAAGTCATCGGTGAGTTCAGCGGAGATCAACTGCAGGCTTTTGTCGACCCAGCTAAGTTACTGGATAGCTTG AAAGCGGGTATCGACATGGGAGCGGATGGCATCAAGTCTTTTGCTGAAACTCATGGGCTGAAAGAGAAAGCGCCTGAAGA GGAAAAGGACAATTCTTCGGTTTCTGTTAATGGTGCGAACGTGAACAGTGCGCAAGGTGCGACTGTGGCTGATGGCAATA CTGAAACAGCAGAAACACAAGATCGTGCCTTTGGCTTTAACTCGCTTAACCTGCCTAACTTGTTTGCGACTATTTTCAGC CAAGATAAGCAGAAGGAAATGAAGTCACTGGTGGAGAATCTTAAACAGAATCTCACCGCCGATCTGCTGAATATGAAGGA GAAAACGTTTGATTTCCTTCGTAATAGTGGCCATCTCCAAGGAGATGGTGATATCAACATCTCCCTAGGAAACTACAACT TCAACTGGGGTGGTGATGGTAAAGATCTCGGTGCGTATCTCGGAGATAACAACAACTTCTGGGGTGGACGAGGCGATGAT GTGTTCTACGCAACAGGCAAGTCAAACATCTTCACGGGTGGAGAAGGCAACGACATGGGCGTTCTGATGGGGCGTGAAAA CATGATGTTTGGTGGTGATGGCAACGACACGGCAGTGGTTGCTGGACGCATTAACCATGTCTTCCTTGGTGCTGGTGACG ACCAGTCGTTTGTCTTTGGCGAAGGTGGTGAAATTGATACCGGTTCAGGCCGTGACTATGTGGTGACTTCTGGCAACTTC AACCGTGTGGATACGGGAGATGATCAAGACTACTCCGTTACGATTGGCAACAATAACCAAGTGGAACTCGGAGCAGGTAA TGACTTTGCCAATATCTTTGGTAACTATAACCGTATCAATGCCGGTGCGGGTAACGATGTGGTGAAACTGATGGGTTACC ATGCCGTGCTAAACGGTGGTGATGGAGATGATCACCTGATTGCAACGGCCATCTCTAAGTTCAGCCAGTTCAACGGTGGT GAAGGCCGTGATCTGATGGTACTTGGTGGTTATCAAAATACTTTCAAAGGTGGCACGGATGTGGACAGCTTTGTGGTGAG CGGTGATGTTATCGACAACCTTGTGGAAGACATTCGCAGCGAAGATAACATTGTCTTCAATGGTATCGATTGGCAGAAAC TGTGGTTCGAGCGCAGCGGGTATGACCTGAAACTGTCGATTTTGCGTGATCCGTCTAACGACAGTGACCAATCGAAGTTT GAGCATATTGGTTCGGTGACATTCAGTGATTACTTTAATGGTAACCGCGCTCAAGTGGTTATCGGAATGAGTGAGAAAGA CCTGTCGGGTGAACGTGAATACACCATGTTATCGGATAGTGCGATTGACGCTCTGGTTCAAGCGATGAGTGGTTTTGAAC CGCAAGCGGGTGACAATGGCTTTATCGACAGCCTAGAGAGTAAATCTCAAGCTGCGATCAGCATGGCGTGGTCAGACGTG GTTCACAAAAAAGGATTGATGGTGTAA Protein sequence : MNRLQINAGIRAKNSVSSMTSMFSETNSKSIVVPTKVSPEPERQEVTRRDVRISGVNLESLSAVQGSQPTGQLASKSVPG FKSHFASTSIGIENELSGLVVVLPKNSAQTFGYVHDSQGNPLFMLTKDMNQGGYSNPVGINDIQGVNNWQTHTIELVTYP SEISDTAAVESRKEAMLWLAKEFTDHINQSNHQSLPHLVSDDGRFTLVISNSKHLIAAGNGTSIDAQGKTIGMTPSGQQA TMAISAKEFGTSSSPEVRLLESAPWYQAGLRDEFLANAKNTTLDDPATAQNVYAYLTSVYSKTADLAKEYGIYINDWDPA SEGFSPNAQGLTDPKVKNAWSILPRTKPVRMLELLSAEDSRYVRQQIAEKLKGTYSESLAKNVFEYFQYGGEVAGHGINN ATTGSVQQPEPAILFEFRSVPSALSDFVPKTASTVKVDVKALDHFDSASRKAIITEVNALVSGSEDFDAWYQEYRASKGQ PPVKNPKSSASANHKAEWLMTQHAEQWAKITAPYTDNHETLTSTKLASNDKEELHALGETSNLENNKQQENVASIINTML NDMLPFYALRTERNLLVQEGDEGFEVRAWPGTEDKSKTIILEDPEDAAQHKAIERFILANFDNFEQMPDELFLVDNKVIS HHEGRTHVLAQKVDGAWQYNATVELMSVTELLDAANVTGKIRGESYQQVIDALTDYHASITEHADYEPESVEKLLNLRKK IEGYVLGHPDSGRVEAMNSLLNQVNTRLDEVSLLSVAEQTIQAQNSFSRLYDQLEAANLKESKHLYLDQNGDFVTKGKGN LANIDLLGSREAVLEKVKLTVSNEYGQTVADTIFAGLSAKDLAKDGKGVDIAGLNKVHQAIEQHLSPVSATLYIWKPSDH SALGHAALQIGQGRTQLEGQAAADFNQQNYVSWWPLGSKSSNISNILNVATKDQPDLKLRWSDFSQPAHQNDTLEHDVAS EENDGFGLHDGDIKLKRFIEKLNAAKGIDASFKEASEGYASVLLGNPDMLETTGIPAHVFQPFVEQWNDTSYDMMDVAHR FAQELRLQAQRSDDPELLEKRIGNVIRQFAERALEEIETFKASQADQGRVFRINLEGLDVAAMQAEWHRLSNDPDARYQL LTKNCSSTVAKVLKAGGADKLIGHTWLPKFGVWTPTELFNFGQALQEAQLEIAAKKQSHQVTDVLDALSGNEKPKENVAI ENDGTPPRDKESLSPLTRFLNNELYGDKEARRKIGEITQTLLDHAVEKGESQKITLQGEAGRLTGYYHQGTAPSEGETSS PSGKVVLFLHGSGSSAEEQASAIRNHYQKQGIDMLAVNLRGYGESDGGPSEKGLYQDARTMFNYLVNDKGIDPSNIIIHG YSMGGPIAADLARYAAQNGQAVSGLLLDRPMPSMTKAITAHEVANPAGIVGAIAKAVNGQFSVEKNLEGLPKETSILLLT DNEGLGNEGEKLRTKLTASGYNVTGEQTFYGHEASNRLMSQYADQIVSGLSSSASVDEDLDQQGLDTTSTKDQGISNKND HLQVVDSKEALADGKILHNQNVNSWGPITVTPTTDGGETRFDGQIIVQMENDPVVAKAAANLAGKHAESSVVVQLDSDGN YRVVYGDPSKLDGKLRWQLVGHGRDHSETNNTRLSGYSADELAVKLAKFQQSFNQAENINNKPDHISIVGCSLVSDDKQK GFGHQFINAMDANGLRVDVSVRSSELAVDEAGRKHTKDANGDWVQKAENNKVSLSWDAQGEVVAKDERIRNGIAEGDIDL SRIGVNNVDEPARGAIGDNNDVFDAPEKRKPETEVIANSSSSNQFSYSGNIQVNVGEGEFTAVNWGTSNVGIKVGTGGFK SLAFGDNNVMVHIGDGESKHSVDIGGYQALEGAQMFLGNRNVSFNFGHSNDLILMMDKSIPTPPLVNPFDGAARISGVLQ GIATSGEGEDWLAAQEQQWTLSGAKKFVKDMSGLDQSSSVDYTTLVELDSQNERDSRGLKHDAEATLNKQYNQWLSGNGN SGTSQLSRADKLRQANEKLAFNFAVGGQGADIQVTTGNWNFMFGDNIQSILDTNLGSLFGLMTQQFTATGQAKTTFTYTP QDLPRQLKNKLLGQLAGVGAETTLADIFGVDYTASGQIVSRNGQAVDGVAILKEMLEVIGEFSGDQLQAFVDPAKLLDSL KAGIDMGADGIKSFAETHGLKEKAPEEEKDNSSVSVNGANVNSAQGATVADGNTETAETQDRAFGFNSLNLPNLFATIFS QDKQKEMKSLVENLKQNLTADLLNMKEKTFDFLRNSGHLQGDGDINISLGNYNFNWGGDGKDLGAYLGDNNNFWGGRGDD VFYATGKSNIFTGGEGNDMGVLMGRENMMFGGDGNDTAVVAGRINHVFLGAGDDQSFVFGEGGEIDTGSGRDYVVTSGNF NRVDTGDDQDYSVTIGNNNQVELGAGNDFANIFGNYNRINAGAGNDVVKLMGYHAVLNGGDGDDHLIATAISKFSQFNGG EGRDLMVLGGYQNTFKGGTDVDSFVVSGDVIDNLVEDIRSEDNIVFNGIDWQKLWFERSGYDLKLSILRDPSNDSDQSKF EHIGSVTFSDYFNGNRAQVVIGMSEKDLSGEREYTMLSDSAIDALVQAMSGFEPQAGDNGFIDSLESKSQAAISMAWSDV VHKKGLMV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1059 | YP_001217005.1 | RTX protein | Virulence | CTX | Protein | 0.0 | 100 |
