Gene Information

Name : VC0395_0092 (VC0395_0092)
Accession : YP_001214933.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : sodium/glutamate symporter
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0786
EC number : -
Position : 102731 - 103957 bp
Length : 1227 bp
Strand : -
Note : identified by match to protein family HMM PF03616; match to protein family HMM TIGR00210

DNA sequence :
ATGAATCAGATCATTTCAATTGGAGCATTAGAGTCTTTTCTTATTGCTATCAGTGTCCTGTTTTTAGGTCACTTTATTAA
TGCCAAACTGCCCATTTTAACCAAGTTCAACATTCCAGAGCCGATTGTGGGTGGGCTTATCGTCGCCTGTGTGATTACTG
CGTTGCACTTTCACGGTATTGATATGGAATTTTCACTGCCGCTGCAAAATGTCTTCATGTTGATGTTCTTTAGTACGGTG
GGCCTTGCGGCCAACTACACCCAACTGATTAAGGGTGGCGCGAAGGTGTTTCTGTTTTTAGCCGTGGCTTCGGTGTTCAT
CATTATTCAAAACGGTGTGGGCGTTTCGCTTGCAGCAGGTTTAGGCTTAGATCCTTTACTGGGCTTGATCGCAGGCTCCA
TCACACTCTCTGGAGGCCATGGCACGGGAGCGGCTTGGGCAAACACGTTTGCCGAAAATTATGGCCTTGCCAATACGTTA
GAAATCGCGATGGCATCTGCCACTTTTGGTTTGATCATCGGTGGGATTATCGGTAGTCCAGTCGCGCAGAAACTGGTTGA
TAAACATGGTATTGAATCTGAGTATGGGCGCGGCACACAAACCCACTCTCGTTTTCCTGAACTGGTCACTTATAACGAAT
ATGAAGAAGATAAAGTCACCGCCAAAAAGGTGATTGAAATCTTGTTTATCTTGCTCATATGCGTTACCGGAGCAAAATAC
CTAGAAGCTTGGGTTAAAACCTTTGAAATTCGTTGGTTGATGATCCCCGATTTCGTTTACGCCCTGTTTATTGGTGTCTT
TATCACCAATCTGCTCGAAGTCACTAAGCTGCGTAAGGTGGATGCGGAGACGGTGGATATTTTAGGCACGGTTTCTTTGT
CGCTGTTTCTCGCTATGGCTCTGATGAGCCTGAAATTGTGGAATATCTTCGATTTAGCACTACCGTTTTTGGTGATCCTC
GCTATTCAATCGGTCGTGCTGGGCGTCTTTTGCTACTTCGTCACCTTCAAAGTGATGGGGGCTAATTATGATGCAGCGGT
GATTTCGGCTGGGCATTGTGGTTTTGGTTTGGGGGCAACGCCTACCGCGGTGATGAATATGGGATCGGTCGTAAAACGCT
TTGGCCCTTCACCACAAGCGTTTATGGTGGTGCCGATCGTCGGTGCTTTCTTTATCGACATCGTTAACCTAATCATCTTG
CAGGGGTACATTTCATTTTTGGGATAA

Protein sequence :
MNQIISIGALESFLIAISVLFLGHFINAKLPILTKFNIPEPIVGGLIVACVITALHFHGIDMEFSLPLQNVFMLMFFSTV
GLAANYTQLIKGGAKVFLFLAVASVFIIIQNGVGVSLAAGLGLDPLLGLIAGSITLSGGHGTGAAWANTFAENYGLANTL
EIAMASATFGLIIGGIIGSPVAQKLVDKHGIESEYGRGTQTHSRFPELVTYNEYEEDKVTAKKVIEILFILLICVTGAKY
LEAWVKTFEIRWLMIPDFVYALFIGVFITNLLEVTKLRKVDAETVDILGTVSLSLFLAMALMSLKLWNIFDLALPFLVIL
AIQSVVLGVFCYFVTFKVMGANYDAAVISAGHCGFGLGATPTAVMNMGSVVKRFGPSPQAFMVVPIVGAFFIDIVNLIIL
QGYISFLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gltS NP_273147.1 sodium/glutamate symport carrier protein Not tested IHT-A Protein 1e-60 47
unnamed AEA34672.1 sodium/glutamate symport carrier protein Not tested Not named Protein 9e-54 46