Gene Information

Name : VC0395_0723 (VC0395_0723)
Accession : YP_001215559.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 784580 - 785257 bp
Length : 678 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCAAACATCCATCATTTCAGCGCAATCACTATCCAAATTAGTCTCCACTAATCAGGAGCATTTAACAATCCTTAAACA
GGTGAATCTCTCGATTCAAGCGGGAGAAAGTGTGGCGATTGTCGGCGCATCAGGCGCGGGAAAATCGACGCTGATGACGC
TACTGGCGGGGTTAGATACGCCAAGTGAAGGGGAAGTGTATCTGTTGGGGAAACCGCTTTCACAACTGGATGATGAAGCC
CGCGCCGCACTGCGCAGTGAATCCGTTGGGTTTGTGTTCCAAAGTTTTCTGCTTATTCCGAGCCTGTCGGCGCTGGAAAA
TGTCACTCTGCCTTGTTTGTTAAAAGGTGAGGCGGAGGATCGCGAGCGCGCCCAGAAGCTGCTCAAAGCGGTCGGTTTGG
AGCATCGAATGCACCATTCGCCCGCACAATTGTCGGGCGGAGAGCAGCAACGCGTAGCGATTGCTCGCGCATTTATGATA
AGTCCCCAAGTGCTGTTTACTGATGAGCCAACGGGCAATTTGGATCAAGAAACAGCTGCAAAAGTGATTGATTTACTGTT
TGAACTGAACCGTGAACACGGCACTACACTAGTGCTGGTGACGCATGACCCTAAACTCGCGCAGCGTTGTCAGCGACGAT
TTTTTATGCAAGCGGGTGAGCTGGAGGAGCGCGTATGA

Protein sequence : 
MQTSIISAQSLSKLVSTNQEHLTILKQVNLSIQAGESVAIVGASGAGKSTLMTLLAGLDTPSEGEVYLLGKPLSQLDDEA
RAALRSESVGFVFQSFLLIPSLSALENVTLPCLLKGEAEDRERAQKLLKAVGLEHRMHHSPAQLSGGEQQRVAIARAFMI
SPQVLFTDEPTGNLDQETAAKVIDLLFELNREHGTTLVLVTHDPKLAQRCQRRFFMQAGELEERV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-39 46
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-40 44
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 6e-36 43
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 5e-37 41
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 9e-38 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0395_0723 YP_001215559.1 ABC transporter ATP-binding protein VFG2059 Protein 9e-20 42