Gene Information

Name : VC0395_0590 (VC0395_0590)
Accession : YP_001215429.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3176
EC number : -
Position : 641392 - 643209 bp
Length : 1818 bp
Strand : -
Note : identified by match to protein family HMM PF01553

DNA sequence :
GTGGGAAAAAGATCGGGCGCATCATATCGCTCAGGGCGACCAAAATTGGCCTGCGCTGATTGGGACAAGCGAATGATGCA
AACCCAGCCATTTCGATTGCCGCGCTTCACCCCATTTGGGGTGATAGAAAAGGGGGTAGAGTTAGCGACGGGGCTTAGTC
AGCTAGAGCGCTATTACCAACAAAGGCCAACCACGCGTGATGGTTTTGAGTTTATGCGTTACACCCTTGAAGCGCTCAAT
GTGCATTACCAAGTGGATAGAGGCCGCGTTGAACAGATCCCCGCGCAAGGGCCTGTGGTGATTGTGGCCAATCATCCGCT
TGGTGCCATTGAAGGGGTGATTTTGGCCGATTTGGTTGGGCAAGTACGCAAAGATGTCAAAGTGCTCGCTAATCAACTGC
TTAAACGCTTACCTGAAATTGAACCTCTGTTCATTGGTGTGGATGTGTTTAATGGCGCGCAGGCGAGTAAAACCAATGCA
CGAGGTATTCGAGAAGCACACCGACATTTAGCGGAAGGTGGCGTACTGATCGTATTTCCCGCCGGTGAAGTTTCGACACC
GCAAAAAGAAACCGGACAGTTGAGTGATATTGACTGGAGTCAATCCGTTGCGAAATTCATTCAGCGTAGCCAAGCGACGT
GCGTGCCGATTTATATTTATGGTCGTAACAGCGCGTGGTTTTATCGCGCTGGAAAAATTCATCCGCTCTTGCGCACCGCC
ATGTTAGGTCGAGAGCTTTTGAATAAAAGCGCGAGCACCATTTCCCTATGCATTGGTCAGCCGATTCCTTATGCGGAATT
AAAAGAGTTCACCAAAGATGAAGATGTGGTCAATTACTTGCGGCTCAATACCTATTTGATGAGCCCGCATGGCCAAGCTG
AATCGGCAAAAGTCTCTTTTACGATTCCGGTAATTGATCCTGTACCTAAAGCAGCTCTCATCGCAGAGCTTGCTCAATTA
GATAAGCAAGCCAAGTTATTGGAGCAGGGTGAATTCACCGTGTACTGCGTACCTTCAACCCACATTCCACTCATGATGCA
AGAAATTGGTCGTGTGCGTGAAATCAGTTTCCGCGCGGTGGGGGAAGGCAGCGGGCAGGCTTGCGATGTGGATGCGTATG
ATCACTATTATTGGCAACTGTTCGTTTGGAATCGAGAGCAGAGCGAGCTGGTTGGTGCGTATCGCATGGGCTTGGTCGAT
AAAATTGTCGCAGAAAGAGGGCTGCAAGGCCTCTATTCCCGTAGCTTGTTTCATTACGATCACGCTTTCTTGGCGACCTT
AGAGAATGCGATTGAGCTTGGTCGCTCAGTGGTGGCTGAACAGTATCAACGTAATCTCAACTCATTGCTTTTACTCTGGA
AAGGCATTGCGCGTTTCGTAGAATTGAACCCACATTACACCCATTTGTTTGGCCCGGTCAGCATCAGCAATGATTACAGC
CCAGCGGCTCGACAACTGATGGCTGCGACTTTATCCATCCATCACTATGATCAACATAAAGCGGCTTTGGTCAGTCCATC
AACCCCTTTGCGTGCCGGAACAGAAGTGTTTTGGCAAAAGAGCTTGCTATCGGCACTCGCCAGTGTCTCTTTGCTCTCAA
AAGTAGTTGCGCGGATGGAGCAGGGCAACGGGCTGCCTGTGTTGCTGCGCCAGTATCTCGGTATGAATGGCAAGTTGGTC
TGTTTTAACGTTGATCCTGCTTTTAACGATGCGTTAGATGGCTTGATTGTGGTGAATTTGAAGCAAGTACCACTGAAAAC
GTTGGCTAAATACATGGGTAAAGAGGCTGCGCAGCATTACCTTTGCTCAGTGACGTAG

Protein sequence :
MGKRSGASYRSGRPKLACADWDKRMMQTQPFRLPRFTPFGVIEKGVELATGLSQLERYYQQRPTTRDGFEFMRYTLEALN
VHYQVDRGRVEQIPAQGPVVIVANHPLGAIEGVILADLVGQVRKDVKVLANQLLKRLPEIEPLFIGVDVFNGAQASKTNA
RGIREAHRHLAEGGVLIVFPAGEVSTPQKETGQLSDIDWSQSVAKFIQRSQATCVPIYIYGRNSAWFYRAGKIHPLLRTA
MLGRELLNKSASTISLCIGQPIPYAELKEFTKDEDVVNYLRLNTYLMSPHGQAESAKVSFTIPVIDPVPKAALIAELAQL
DKQAKLLEQGEFTVYCVPSTHIPLMMQEIGRVREISFRAVGEGSGQACDVDAYDHYYWQLFVWNREQSELVGAYRMGLVD
KIVAERGLQGLYSRSLFHYDHAFLATLENAIELGRSVVAEQYQRNLNSLLLLWKGIARFVELNPHYTHLFGPVSISNDYS
PAARQLMAATLSIHHYDQHKAALVSPSTPLRAGTEVFWQKSLLSALASVSLLSKVVARMEQGNGLPVLLRQYLGMNGKLV
CFNVDPAFNDALDGLIVVNLKQVPLKTLAKYMGKEAAQHYLCSVT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0489 NP_230143.1 hemolysin Not tested VSP-2 Protein 3e-157 55