Gene Information

Name : VC0395_0382 (VC0395_0382)
Accession : YP_001215223.1
Strain :
Genome accession: NC_009456
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 418057 - 418740 bp
Length : 684 bp
Strand : +
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGCTGCATTTTCAAAGTATAGAAAAACAGTACTCATTGGGAGTTCAAAGCGTGCCAGCGCTACGTGGTGTGAGCGGTGT
GGTACAGCAAGGCGAGATGTTAGTGCTGTGTGGCCCCTCCGGCTCGGGTAAAAGCACTTTGCTCAACATCTTGGGATTAC
TTGACCCTAATTACCAAGGTGAAGTGGCATTAGAGGGACGTGTATATCCACGTAAGGGTAAGTCTGCCGCCTTACTGCGT
CGTACTCAGTTTGGTTTTGTGTTCCAAAAATTCAACTTAGTATCCGTGATGACGGCGCTAGAGAATGTCGCCTATCCCTT
GATGCTTAATGGTTTTAGCCGTCGTGATCAGCACAAGTTAGCACATGACATGCTAACCAAGGTTGGATTAGAAGCGGTGA
TGCAGCAGCGTCCAGATCATCTTTCCGGTGGTCAGCAGCAGCGTGTAGCGATAGCTCGGGCGTTGGTTCACAACCCGAAA
TTGGTGGTCGCGGATGAGCCTACCGCGAGTCTGGATAGTCAAACAGCCAACCTCGTGATCAGTTTAATGAAAAGTCTTGG
TCATGAGTTAGGCACGACTTTTGTGGTTGCCACTCATGACGGGCGCATGGCAGCTCAGTGCGATCGCACCCTCAATCTGG
TGGACGGACAAATTTCATTGGAGGCGATGCAATGGGCAAGTTGA

Protein sequence : 
MLHFQSIEKQYSLGVQSVPALRGVSGVVQQGEMLVLCGPSGSGKSTLLNILGLLDPNYQGEVALEGRVYPRKGKSAALLR
RTQFGFVFQKFNLVSVMTALENVAYPLMLNGFSRRDQHKLAHDMLTKVGLEAVMQQRPDHLSGGQQQRVAIARALVHNPK
LVVADEPTASLDSQTANLVISLMKSLGHELGTTFVVATHDGRMAAQCDRTLNLVDGQISLEAMQWAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
VC0395_0382 YP_001215223.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-32 47
VC0395_0382 YP_001215223.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-33 43