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Name : VC0395_0261 (VC0395_0261) Accession : YP_001215102.1 Strain : Genome accession: NC_009456 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 298547 - 300166 bp Length : 1620 bp Strand : - Note : identified by match to protein family HMM PF00005; match to protein family HMM PF08352 DNA sequence : ATGTCACCCAATCCACTTTTGCAAGTTCGTAATTTAAGCGTGAGCTTTACCACCAATGATGGTGTTGTCGATGCGGTGAA AAACGTCAGCTTTGATATACGCCCCGGAGAAACCCTTGCGATTGTCGGTGAGTCAGGTAGTGGTAAATCGGTTTCGACCA ACGCCTTGATGCAACTGCTGCCTAAAAACGCGCGGATCCATCCAGAATCGAGCATCATGTTTGAAGGTGAAGAGCTGCTC AATAAAACGGACACGCAGATGCGCCGCATCCGTGGGGATCGGATTGGCATGATCTTCCAAGAGCCGATGACTTCACTCAA TCCCTATATGCGTGTTGGCGTTCAAGTTGCTGAAGCTATTCGTTGCCACCGTAATGTCAGCCAGAATCAAGCGAAACAGC GAGTCTTGGAGCTGTTTCAGCTCGTTCATCTGCCCGACCCCAAAGGCGCTTACCAAAAATTCCCGCATGAGTTTTCCGGC GGTCAGTTACAGCGCATTATGATTGCGATGGCACTGATCAATGAGCCGGATATTTTGATCGCCGATGAACCGACCACGGC GCTCGATGTCACAGTTCAAGCCGAAGTGCTCCGACTCATCAAAGAGATCCAAGCCAATATGGGCATGGCGATTTTGTTTA TCACCCACGATTTAGGTGTGGTGAAATTTGTTGCCGACCGCGTGCTGGTAATGTGTAAAGGGGATGTGGTAGAGCAAGGC TCTACTGAACAGCTTTTCCTGCAACCTGAGCATGATTACACACGCATGCTGATTAACTCGATACCCAAAGGCAGTAAAGA CCCAGTTGCTGTCGATGCAGCACCACTGCTCAAAGCCGAAGATATTCGAGTCAAGTTTCTGGTTAAACCGTACTTTATCA GTCGTCGTAATCAGTACTTTGAAGCAGTGAAAGGGATTTCTCTTGAACTCAAGCAAGGTGAAACTCTCGGTATCGTAGGC GAATCTGGCAGCGGAAAATCCACATTAGGGCGAGCTTTGATTGGTTTACTGCCTTCCACGGGTCAGATTGCCTTCAAAGG GCAAGACTTTCGCGCTTTGAGCGAGAAACAGCGCTTAGCCCTGAAGAAAGACATTCAGATGGTGTTTCAAGACCCTTATG GCTCGCTTTCTCCACGTATGACCGTTGGCGAAATCATCACTGAAGGGCTTTTGGTTCACCAACCTCACATCAGTAAGTTG GAACGTATGCAACGGGCGAGACGAGCGCTCGAAGAAGTGCGATTAGATCCGAATTCGATTAATCGTTACCCACATGAGTT CTCCGGTGGTCAACGTCAGCGGATTGCGATTGCTCGGGCGCTAATTCTGGAACCTTCCTTTATTTTATTGGATGAGCCCA CTTCAGCGCTGGATCGCTCCGTACAACTGACGGTCATTGAACTGCTAAAAGAGATTCAAAAACGACGCAACATCGGCTAT CTGTTCATCAGCCACGATCTTGCCGTGGTAAAAGCGTTATCGGATCGCGTGTTGGTAATGCAAAAAGGGCAAGTGATGGA ACAAGGCAGTGCGGAATCCATCTTCCATAATCCACAACATGAATACACCAAAAAACTGATCGCTGCTTCTTTCGACATTC TGGAAGAAAATGCAGCATGA Protein sequence : MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLLPKNARIHPESSIMFEGEELL NKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAIRCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSG GQLQRIMIAMALINEPDILIADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG STEQLFLQPEHDYTRMLINSIPKGSKDPVAVDAAPLLKAEDIRVKFLVKPYFISRRNQYFEAVKGISLELKQGETLGIVG ESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALSEKQRLALKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKL ERMQRARRALEEVRLDPNSINRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFDILEENAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-82 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-99 | 42 |
